Gene Noc_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1651 
Symbol 
ID3705682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1845650 
End bp1846654 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content47% 
IMG OID637738127 
Producthypothetical protein 
Protein accessionYP_343653 
Protein GI77165128 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0104013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGACGTT ATTGGATTTT AGCCCTGCTA GCCATGGGCC TAGGTTTGGC GATCCCATTC 
AGCTATGGTG GGCTGGCAGT TTTTGAGCGT CTTGGCCAAG TGCCCCTTTG GCTCCCTCTG
CTTACCCTGG CAATGATCGT GCTTGGTTGG AATTTTAATG CTGCTAAACT GCGGATTTTA
GTCTCTGCGG TAGATACTAA ACTCTCACAT CGAAGCGCGC TCGGAACGGT TATGGCATGG
GAATTTGCTT TTTCCGCTAC TCCTGCAGGG AGCGGCGGAA TTGTTAGCTA TATTTACCTT
TTAAATAGAT ACGGTGTGAA AACTGCTCAT GCAGCAGCCA TCTTTACCAT GGAGATGGGA
ATAGACTTAT TGTTTTTTAT TACCGCTTCA ATCATCGTAG TGATAAAGTT GGCTACCAAT
GTGGCCTATG ATATTCATCT CGGGTTTGTT TTGGTGGTGG TATTGCTCAC CGGTGGGATG
GGGGTAATGT GGATTCTGGC TCGGCAATAT CAAAAATTGT TGCGAGTATT TGGCTATCTA
TTAAAATTAT TCAAGGTCTC TACTCCCCGT CGCAAGCGAG CAGCGCGCTG GATGTTACGT
CTTCGCCATG GTCTAATGCT CCTCTTAGGA CTCCCTCGAC GGCATTTATA CGCTGCTTAT
CTCTTCTGTG TCGCTCATTG GCTGTTACGC TTTAGTGTTC TTTATGTTCT CCTTTTAGGC
CTAGGCGAAA ATGTGCCCTG GCCTTATCTA TTTATTACCC AAGTATTAAT ACTGACCCTG
GGACATTTCA CCTTCTTGCC GGGGGGGAGC GGGGGAGTCG AATTGGGATT TGGGGTGATG
CTAGGACCTT TTCTTGATAG CGCCACACTG GCAACTGCCC TTGTTCTCTG GCGTTTTGCT
ACCTTTTATT GGTATCTTAT TGCTGGCGCA CCGGTATTTG TCGCAGTAGC AGGGCCAGTG
ATATTTCAAA CCTTAGCCCA AGCTACTACT AAAAAGTCCT TATAA
 
Protein sequence
MRRYWILALL AMGLGLAIPF SYGGLAVFER LGQVPLWLPL LTLAMIVLGW NFNAAKLRIL 
VSAVDTKLSH RSALGTVMAW EFAFSATPAG SGGIVSYIYL LNRYGVKTAH AAAIFTMEMG
IDLLFFITAS IIVVIKLATN VAYDIHLGFV LVVVLLTGGM GVMWILARQY QKLLRVFGYL
LKLFKVSTPR RKRAARWMLR LRHGLMLLLG LPRRHLYAAY LFCVAHWLLR FSVLYVLLLG
LGENVPWPYL FITQVLILTL GHFTFLPGGS GGVELGFGVM LGPFLDSATL ATALVLWRFA
TFYWYLIAGA PVFVAVAGPV IFQTLAQATT KKSL