| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1646 |
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| Symbol | |
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| ID | 3705677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1841701 |
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| End bp | 1842444 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637738122 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_343648 |
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| Protein GI | 77165123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATTAG GAAAAGTACG CATCGTATTG GTAGAAACCA CCCATCCCGG CAATATTGGA
GCAGCGGCGC GAGCCATGCG TACCATGGGA TTATGCCACT TATATTTAGT CAATCCAAAG
CGCTTTCCCT GCGCTGAAGC TACAGCAATG GCTTCGGGCG CAGATAAATT ACTAGCCCAA
GCAAAGGTTT GCACCAGCTT GGCCCAAGCA ATAACGGGTT GTCAAAAAGT ATTTGGACTG
AGTGCCAGGT CTAGAAGTAT TTCCTGGCCA GTGCTAAATA CACGGGACTC TGGCGTCCTC
GTTGTCCAAG AGGCCCTAAG AGGAGGAGAG GTAGCAATAG TATTCGGCCG AGAGAATTCA
GGGCTTTCTA ACCTTGAGCT AGATCGTTGT AATTATTGGG TTCATATTCC AAGTAATCCA
ACGTACAGCT CCCTAAATTT AGCGGCGGCG GTACAGGTGA TGGCCTATGA GGTCCGGATG
GCTTCCATGA TGGATGACTC CCGGCACTCC GCAGAATCGC CATCAGCCTC TATAGGGGAG
ATAGAAGGTT TTTTTAGACA CCTAGAGCAA ACCTTAATAA AGATCGATTT TCTTAACTCG
AGTAATCCCA AGCTTTTAAT GCGACGCTTA CGCTGCCTGT TTTTTCGCGC TCATCTTAAT
GTACGTGAAA TCAATATCTT ACGGGGAATT TTAACCGCCG TCCAGAAAAA AGCGCAGATC
CCCGAAGCTG CGATGAAAAA ATAA
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| Protein sequence | MPLGKVRIVL VETTHPGNIG AAARAMRTMG LCHLYLVNPK RFPCAEATAM ASGADKLLAQ
AKVCTSLAQA ITGCQKVFGL SARSRSISWP VLNTRDSGVL VVQEALRGGE VAIVFGRENS
GLSNLELDRC NYWVHIPSNP TYSSLNLAAA VQVMAYEVRM ASMMDDSRHS AESPSASIGE
IEGFFRHLEQ TLIKIDFLNS SNPKLLMRRL RCLFFRAHLN VREINILRGI LTAVQKKAQI
PEAAMKK
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