| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1617 |
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| Symbol | |
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| ID | 3705740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1804840 |
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| End bp | 1806678 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738093 |
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| Product | glycoside hydrolase |
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| Protein accession | YP_343622 |
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| Protein GI | 77165097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTACC AACCTATTGA AAATTATGGA ATGATTGGCG ACCTGCGGAC AGCCGCGTTA
GTGGGGATTA ATGGCTCCAT TGATTGGCTC TGTATCCCCC ATTTTGACTC TCCCAGCGTT
TTTGCGGCGC TGCTTGATGA TAAGAAAGGC GGTCGGTTTC AAGTTGCACC GATAGATAAT
GGGGCCAAGT GCAAACAGTT TTATTGGCCT GAAACCAATG TGCTGGTGAC CCGTTTCCTG
GCCCCGGAGG GGGCCATTGA AGTGACTGAT TTTATGCCAG TGAGCAAGGC CGTCGCTGGT
GAACCTCATT TCCATCAGTT AGTTCGCCGC GTTACTGCGG TTCGGGGCCG CAGCCGATTA
CGATTAACCT GCCATCCCGC CTTTAATTTT GCCCGTGATG AACATACCAC GGCATTGGTG
GACAATGGCG CTGAGTTTTA TTCGAAAGAC TTAAATTTGG CCTTATCGGC GAGAATTCCC
CTGCAACGAA AGGGGGAGGG GGTCGAGGCG GAGTTTACCT TAAACCAGGG TGAAACAGCT
GTTTTTATTT TGCATCAAAT CACTGCTGAA TCCCGCTGCG CCCCTTGTCT TTCCGTCGCT
GAAGCGGAAG CAAGCTTTCG GCAGACAGTG CTCTATTGGA GACAGTGGCT GGGTAAATGC
ACTTATCAAG GGCGCTGGCG TGAAATGGTG TACCGTTCTG CCTTGGCGCT TAAGCTTTTA
ACCTTTGAAC CTAGCGGGGC TATTATCGCA GCCCCGACTT GTAGCCTGCC CGAGGATTTG
GGAGGAGTGC GCAACTGGGA TTATCGCTAT ACTTGGATTC GAGACTCTGC TTTTACTGTC
TATGCTCTGC TGAGAATCGG GTTTACCGAG GAAGCGGAGC GTTTCATGCA ATTTATCGAG
AGCCTCTGCC CCGCAGTGGC CACGGAGCGC CCCTTGCAGA TCATGTATCG GATAGATGGG
GGTCGCGATA TTCCCGAGGA AATTCTCGAT CATATGGAAG GCTATCGTGG TTCCCGGCCG
GTTCGGGTCG GTAATGCCGC CTATCGTCAA CTTCAGTTGG ATATCTATGG GGAGTTGATG
GATGCAGTCT ACCTTCATAA TAAATATGGC GCGCCAATTT CCCATGATTT GTGGGTCCGT
TTACGGCGGT TGGTTGATTG GGTTTGTGAG AATTGGCAAC AGCCGGATGC CGGGATCTGG
GAAGTTCGTG GGGGACATAA GCATTTCGTG TACTCCAAGC TCATGTGCTG GGTTGCCATA
GATCGGGCGC TACGCCTAGC CCATCAACGA TCCTTTCCAG CCGATCGGGG TCATTGGCTT
AAGGTGCGTG ACCAGATTTA TCTGGATATT ATGGAAAAGG GCTGGCACCC TGAACGTCAA
GCCTTTGTCC AGCATTACGA GAGCGGAGCG TTGGATGCGG CTAATCTGAC CCTGCCTTTA
ATGCAGTTTC TCTCTCCCAC TGACCCCCGG ATGCTAAAAA CCCTGGATGC TATCCTTAAG
CCCCCCGAGT TAGGCGGTCT AGTATCCAAC AGCTTGGTGT TCCGTTATAA CCTGGGCGAA
ACCGAAGATG GGCTGGAAGG AGATGAAGGG ACTTTCAATA TTTGCACTTT CTGGCTAGTG
GAAGCCCTCA CCCGCGCCGG GCGTCATCAT CCACCCCGGC TTGAGGAAGC CCGCTTGATA
TTCGAGCGCA TGCTGGGCTA TGCCAATCAC CTTGGCCTAT ATGCTGAAGA AACGGGTTAT
AGTGGTGAAG CCCTTGGCAA TTTTCCCCAG GCGTTTACCC ATTTAGCGTT GATCACCGCG
GCATTTAATT TGGATCAGAC GTTAGATTCC CGGCATTAG
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| Protein sequence | MAYQPIENYG MIGDLRTAAL VGINGSIDWL CIPHFDSPSV FAALLDDKKG GRFQVAPIDN
GAKCKQFYWP ETNVLVTRFL APEGAIEVTD FMPVSKAVAG EPHFHQLVRR VTAVRGRSRL
RLTCHPAFNF ARDEHTTALV DNGAEFYSKD LNLALSARIP LQRKGEGVEA EFTLNQGETA
VFILHQITAE SRCAPCLSVA EAEASFRQTV LYWRQWLGKC TYQGRWREMV YRSALALKLL
TFEPSGAIIA APTCSLPEDL GGVRNWDYRY TWIRDSAFTV YALLRIGFTE EAERFMQFIE
SLCPAVATER PLQIMYRIDG GRDIPEEILD HMEGYRGSRP VRVGNAAYRQ LQLDIYGELM
DAVYLHNKYG APISHDLWVR LRRLVDWVCE NWQQPDAGIW EVRGGHKHFV YSKLMCWVAI
DRALRLAHQR SFPADRGHWL KVRDQIYLDI MEKGWHPERQ AFVQHYESGA LDAANLTLPL
MQFLSPTDPR MLKTLDAILK PPELGGLVSN SLVFRYNLGE TEDGLEGDEG TFNICTFWLV
EALTRAGRHH PPRLEEARLI FERMLGYANH LGLYAEETGY SGEALGNFPQ AFTHLALITA
AFNLDQTLDS RH
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