Gene Noc_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1605 
Symbol 
ID3705728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1792096 
End bp1792572 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content53% 
IMG OID637738081 
Producthypothetical protein 
Protein accessionYP_343610 
Protein GI77165085 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.466009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA CTCTTACCTC CCCCGCTTTC AATCATCAGG GAGAAATTCC CCTCGACTAT 
ACCTGTGATG GCCAAGATAT TTCTCCTGAA CTGTCGTGGT CCAACCTCCC CGAGGGAACT
AAAAGTTTAG TCTTGATCGT TGATGATCCG GATGCGCCAG ACCCAGCAGC ACCGAAAATG
ACCTGGGTCC ACTGGCTACT TTATAATATT CCGCCCTCAG CGGCTGGCTT GCCCCGGGGG
GTACTATCCT CAGATCTGCC CACTGGCACT CGGGAGGGCT TAAATGATTG GGATCGCGTC
GGCTATGGTG GCCCTTGTCC TCCCATAGGA CGCCATCGTT ATTTTCATAA GCTTTATGCC
TTGGCGGTGG AGTTGCCGGA TCTAGGAACA CCCACTAAAG AAGCTCTGGA GAAGGCCATG
AGCGGCCATA TATTGGGGCA GGCAGAGTTG GTAGGTACCT ACCAACGGGC GAAGTGA
 
Protein sequence
MSLTLTSPAF NHQGEIPLDY TCDGQDISPE LSWSNLPEGT KSLVLIVDDP DAPDPAAPKM 
TWVHWLLYNI PPSAAGLPRG VLSSDLPTGT REGLNDWDRV GYGGPCPPIG RHRYFHKLYA
LAVELPDLGT PTKEALEKAM SGHILGQAEL VGTYQRAK