| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1604 |
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| Symbol | |
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| ID | 3705727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1786948 |
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| End bp | 1791612 |
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| Gene Length | 4665 bp |
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| Protein Length | 1554 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637738080 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_343609 |
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| Protein GI | 77165084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.505347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG GAACCTTACC ACGTAAGCAA GGCTTGTACG ACCCTCATAA TGAACACGAC
TCTTGTGGGG TTGGTTTTGT CGCCAATGTC AAGGGCCATA AAAGCCATAA CCTCATCCGA
AAGGGTCTGC AAATTCTGAA AAACCTAACC CACCGCGGCG CTGTGGGTGC AGACCCGCGA
GCTGGAGATG GGGCGGGAAT CCTGCTGCAA ATGCCTGACC AGTTCCTCCA GGAAGAATGC
GCCCGTCAGG GAATAAACCT ACCACCCGTG GGCGAATACG GCGTTGGTAT GCTTTTTCTC
CCCCAAGGAG CTGAAGCCCG TGCCACTTGC GAAGAGCTAA TCAGCCATTA TATTGATGCC
GAAGGGCAGA CTTTACTGGG CTGGCGAGAT GTGCCTACCG ACAACACCCA GCTCGGGGAG
AGCGTTAAAG CAGTAGAGCC GATCATCCGG CAGGTTTTTA TCGGCCATGG CGACAATACC
TCCTCAGGCG ATCCTTTTGA GCGTAAGCTC TTTGTCATCC GCAAACAAAT AGAAAATGCT
GTCCGGGAGC TGGACCAGGC GGATCAGGCA ACCTTTAGTA TTCCTTCCCT GTCCTCCCGG
ATATTAGTGT ATAAGGGGAT GCTGCTGGCC AGCCAAGTGC CTTCCTATTT TACAGACTTG
ACAGACGAAC GCATGATTAC CGCTCTGTCG CTAGTCCATC AGCGCTTCTC CACGAATACC
TTCCCTTCCT GGGATCTCGC TCAGCCATTC CGAATGATTG CTCATAATGG AGAAATCAAT
ACCCTGCGGG GTAATATTAA TTGGATGGCA GCCCGCCGCC ACGCCATGAC CTCCAAGTTG
CTAGGCGATG ATCTCAAAAA ACTTTGGCCC CTCATTGCTG AAGGGCAATC CGATTCCGCC
TGCTTTGATA ACGCCCTAGA GCTTCTCGTT GCTGGCGGCT ACCCTCTAGC CCATGCCATG
ATGCTACTCA TTCCCGAGGC TTGGGCCGGC AACCCGTTAA TGGAGGCGAA ACAGCGCGCC
TTTTACGAAT ATCATGCGGC CCTGATGGAG CCTTGGGATG GGCCGGCAGC CATGGCCTTT
ACCGATGGTC GCATGATTGG AGCCACCCTA GACCGCAATG GCCTCCGTCC GGCCCGCTAT
CTGATCACTA ATGATGATTT GGTGGCCATG GCCTCGGAAA TGGGGGTTCT GGATATCCCC
CAGGAGCGGA TCATCAAAAA GTGGCGGCTG CAACCCGGCA AGATGCTGCT CATCGACTTA
GAAGCGGGGC GCATCATTGA TGATGACGAA CTAAAAAGAA AGTTAGCAGA GGCCGAACCC
TATCAACAAT GGCTAGACCA GACCCAAATC CGGATCGAGC ACCTGCCTGC CGAAACCGGA
CCCATGGCCC CGGACCCAGC CACGCTTTTG GACCGCCAAC AGGCTTTTGG CTATACCCAG
GAGGATCTTA AATTTCTCCT CACCCCCATG GCTGTCACCG GGCAGGAAGC CGTGGGCTCC
ATGGGCGCGG ACGAACCCCT AGCAGTACTC TCTAACCGAG CTATTCCCTT ATCCAATTAT
TTCAAACAGC GTTTCGCCCA GGTGACCAAT CCACCCATCG ATCCGATCCG GGAAGAGCTG
GTCATGTCCC TGGTTTCCTT AATTGGGCCA CGGCCTAACT TGCTGGGGCA CCACCACCAG
GCAGGTGCCC ATAAGCGTTT AGAGGTGAGT CAGCCGGTCC TCACGAATAC CGATCTGGAA
CGAATTCGGC GCATCGAAGA CCATACGGGG GGCGCTTTTC GTACCCATAC GCTGACTATC
TGCTACCCGG TGACAGAAGG GGCTGCCGGC ATGGAAGCAG CTCTGGGAAA ACTGTGCCGG
AGCGCAGAGC AGGCCGTCCA TAAAGGATAC AATATTTTGA TCCTGTCGGA TCGGGGCGTG
GATATAGACC ATGTCGCCAT TCCCGCCCTG CTGGCTACCT CCGCCGTACA CCATCACCTG
GTACAAACGG GACTGCGAAC CGAGACAGGA CTGGTAGTGG AAACGGGCGC TGCCCGGGAG
GTCCACCACT TTGCTGTCCT GGCAGGTTAT GGCGCCGAGG CAATTAATCC TTATCTGGCT
TTCGAAACCC TCTCGGCTCT CCGCCAACAA CTCCCCGAAG AACTCAACGA AGAGGAGATC
CAAAAACGCT ATATTAAAGC AGTGGGTAAA GGTCTATTAA AAATTATGTC CAAGATGGGC
ATCTCTACCT ACCAGTCCTA TTGCGGCGCG CAGATCTTCG ATGGGGTAGG ACTCTCCCAT
AATTTTGTAG AAAAATACTT TACCGGCACG GTTTCCACCA TTGAAGGCGC AGGTCTTAGC
GAGATTGCCG AAGAAGCCTT CCGCTGGCAT CGGAACGCTT ATAGCGACGT TCCCCTCTAT
CGCCATGGAC TCGATGCCGG AGGCTACTAT GCCTACCGCC TGCGTGGCGA AGACCATATG
TGGACCTTCG ACACTATCTC CAAGCTTCAA CATGCCAGCC GGGCCAACGA GGCTAAGACT
TATGAAGAAT ACGCCCAATT GGTCAACCAA CAAAATAAAC GGCTACTTAC CCTGCGGGGT
TTATTGGAGT TCCGGTTCGC GGCTAATCCT CTTCCCTTGG AGGATGTGGA GCCCGCAAAA
GACATTGTCA AGCGCTTCGC CACCGGCGCC ATGTCCTTTG GCGCCATCTC CCACGAAGCC
CATACCACCC TGGCCATCGC CATGAACCGT ATTGGCGGCA AATCCAATAC AGGAGAAGGT
GGCGAGGAAG CGGAGCGCTT CAAGCCCCTG CCCAATGGGG ATTCCATGCG CTCGGCTATT
AAACAAGTGG CCTCTGGCCG CTTTGGCGTC ACCGCCGAAT ATCTGGTGAA CGCGGATGAT
ATTCAGATCA AGATGGCCCA AGGCGCTAAG CCTGGCGAAG GGGGGCAACT CCCCGGCCAC
AAAGTGGACG CCACCATTGC CCAGGTTCGC CATTCGACTC CCGGGGTAGG ACTGATTTCC
CCTCCCCCTC ATCACGATAT TTACTCTATC GAGGATCTGG CCCAGCTCAT CTTTGATCTC
AAAAATGTCA ATCCCCAAGC CAGAATCAGT GTCAAACTGG TTTCTGAAGT CGGGGTAGGC
ACCGTGGCTG CGGGGGTTTC CAAAGCCCAC GCGGATCATG TCACCATCGC CGGTCATGAT
GGCGGGACAG GCGCCAGCCC CCTGACTTCC ATCAAGCATG CGGGTCTGCC CTGGGAAATC
GGACTTGCCG AAACCCAGCA AACCCTGGTG CTCAACCGGC TTCGGGGCCG TATCGCGGTC
CAAGTGGACG GAGGAATACG CACCGGACGG GATGTGGTGA TTGGCGCTCT GCTAGGCGCC
GATGAATTTG GCTTCGCCAC CGCGCCCCTT ATCGTTGCGG GCTGCATCAT GATGCGCAAA
TGCCACTTGA ATACCTGCCC AACGGGAGTA GCCACCCAAG ATCCCGTATT ACGGAAACTT
TTTACCGGCA AGCCCGAGCA TATCGTCAAC TACTTTTTCT TGGTTGCCGA AGAAGTCAGG
CAGATCATGG CCCAGTTGGG ATTCCGCTGT TTTGATGAGA TGATCGGACG CCTGGATGTC
CTCGATACCC GCCAGGCCCT TGATCACTGG AAGGCCAAGG GCCTGGATTT CTCCCGAATC
CTCTACCACC CTACCACCGA CCCGGAAGTG CCCCTTTACA ATAGGGAACG CCAGGATCAT
GGGCTCGATG AGGTCTTGGA TCGTTGGCTT ATTGCTCAAG CCCAGCCTGC CTTGGAACGC
CAGGAAGCAG TCCAAATCGA GACTCCGGTA GGCAATACCG ACCGTACTGT AGGGGCCATG
CTCTCTGGCG AAGTAGCGCG CCGTTACGGT CATAAGGGTC TTCCGCAAGA TACTATTTAC
ATTAGAACCG AGGGTACGGC CGGACAAAGC TTTGGCGCTT TTCTTGCCCA TGGTATTTCC
CTGGAGCTTA TTGGGGAAGC GAACGATTAC GTGGGCAAAG GTCTCTCTGG CGGCCGGTTA
GTGATTACGC CTCCTCCAGA ATGCCCCATC GTGCCCGAGG AGAATATTAT CATCGGCAAT
ACCGTACTTT ATGGTGCCAT CAGCGGCGAG TGCTACTTCC GGGGCGTAGC GGGGGAGCGT
TTCGCGGTCC GTAATTCTGG CGTGACTGCC GTGGTGGAAG GCGTGGGAGA CCATGGTTGC
GAATATATGA CGGGCGGAGT CGTGGTGGTG CTCGGCAGAA CCGGGCGCAA TTTTGCCGCC
GGCATGAGTG GCGGCATCGC CTATGTGCTG GATGAAGCAG GAAACTTTGA GCAACGTTGT
AATTTGGCGA TGGTGGAACT CGAGCCCATT GCCGAAGAGG ATGAGGCTTT AGAACATTTG
GAACACCAGG GGGGCGATCT GGAAACCCAT GGCCGGGTGG ATATCAGTCA CCATATCAGC
CGCTTCGATG GGCAGCGTCT CAGAAATCTC ATTGAAAAAC ACCAACACTA CACCCACAGC
GGGCGGGCCC GCCAAATACT GGAGAACTGG AGCGCGTATT TGCCCCGGTT CGTTAAGGTC
ATGCCGGTGG ATTACCGGCG CGCCTTGCAG GAAATGGAGC ACGCCCAAGC AGCAAGACAC
ACTATCCCTG TCATGCAACA GGAGGCACTC GACCAATATG GGTAA
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| Protein sequence | MSDGTLPRKQ GLYDPHNEHD SCGVGFVANV KGHKSHNLIR KGLQILKNLT HRGAVGADPR
AGDGAGILLQ MPDQFLQEEC ARQGINLPPV GEYGVGMLFL PQGAEARATC EELISHYIDA
EGQTLLGWRD VPTDNTQLGE SVKAVEPIIR QVFIGHGDNT SSGDPFERKL FVIRKQIENA
VRELDQADQA TFSIPSLSSR ILVYKGMLLA SQVPSYFTDL TDERMITALS LVHQRFSTNT
FPSWDLAQPF RMIAHNGEIN TLRGNINWMA ARRHAMTSKL LGDDLKKLWP LIAEGQSDSA
CFDNALELLV AGGYPLAHAM MLLIPEAWAG NPLMEAKQRA FYEYHAALME PWDGPAAMAF
TDGRMIGATL DRNGLRPARY LITNDDLVAM ASEMGVLDIP QERIIKKWRL QPGKMLLIDL
EAGRIIDDDE LKRKLAEAEP YQQWLDQTQI RIEHLPAETG PMAPDPATLL DRQQAFGYTQ
EDLKFLLTPM AVTGQEAVGS MGADEPLAVL SNRAIPLSNY FKQRFAQVTN PPIDPIREEL
VMSLVSLIGP RPNLLGHHHQ AGAHKRLEVS QPVLTNTDLE RIRRIEDHTG GAFRTHTLTI
CYPVTEGAAG MEAALGKLCR SAEQAVHKGY NILILSDRGV DIDHVAIPAL LATSAVHHHL
VQTGLRTETG LVVETGAARE VHHFAVLAGY GAEAINPYLA FETLSALRQQ LPEELNEEEI
QKRYIKAVGK GLLKIMSKMG ISTYQSYCGA QIFDGVGLSH NFVEKYFTGT VSTIEGAGLS
EIAEEAFRWH RNAYSDVPLY RHGLDAGGYY AYRLRGEDHM WTFDTISKLQ HASRANEAKT
YEEYAQLVNQ QNKRLLTLRG LLEFRFAANP LPLEDVEPAK DIVKRFATGA MSFGAISHEA
HTTLAIAMNR IGGKSNTGEG GEEAERFKPL PNGDSMRSAI KQVASGRFGV TAEYLVNADD
IQIKMAQGAK PGEGGQLPGH KVDATIAQVR HSTPGVGLIS PPPHHDIYSI EDLAQLIFDL
KNVNPQARIS VKLVSEVGVG TVAAGVSKAH ADHVTIAGHD GGTGASPLTS IKHAGLPWEI
GLAETQQTLV LNRLRGRIAV QVDGGIRTGR DVVIGALLGA DEFGFATAPL IVAGCIMMRK
CHLNTCPTGV ATQDPVLRKL FTGKPEHIVN YFFLVAEEVR QIMAQLGFRC FDEMIGRLDV
LDTRQALDHW KAKGLDFSRI LYHPTTDPEV PLYNRERQDH GLDEVLDRWL IAQAQPALER
QEAVQIETPV GNTDRTVGAM LSGEVARRYG HKGLPQDTIY IRTEGTAGQS FGAFLAHGIS
LELIGEANDY VGKGLSGGRL VITPPPECPI VPEENIIIGN TVLYGAISGE CYFRGVAGER
FAVRNSGVTA VVEGVGDHGC EYMTGGVVVV LGRTGRNFAA GMSGGIAYVL DEAGNFEQRC
NLAMVELEPI AEEDEALEHL EHQGGDLETH GRVDISHHIS RFDGQRLRNL IEKHQHYTHS
GRARQILENW SAYLPRFVKV MPVDYRRALQ EMEHAQAARH TIPVMQQEAL DQYG
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