Gene Noc_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1580 
Symbol 
ID3705799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1755210 
End bp1755929 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content51% 
IMG OID637738060 
Producthypothetical protein 
Protein accessionYP_343589 
Protein GI77165064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCC TTGATGAAAA AACTTTTGAA GCACTCCAGG ATGAATGGTC CCATGTGCTT 
GAGCTGCATA AAGCGGCTCG CCGTAAACGC ATTCATGCCA GAGTGATTCA GTGGGAAACG 
CGCCTTTCTG AGCTAAAAGA TGAGCAGAAG AGGCTTATCA ACTCGGGGCG GTGGGTGAGA 
GGGCCTGCGG ACATCCTTTC TGTCATCGGC AAGGCCCGGA GAGAGCTTTA TCATTCGGCT 
ATTTTACGCT GGTTGCTTGA TCCCCTATCG CCTCATGGGC TTGGGATTAA ATTTCTCCGG 
GGATTTCTTC AAGCAGCGAA GCTCCCCCCG CTCGTAACTA AATTGGCACC TGAGGATATC 
CTCTCTATTG AGACCGAAGT GGCCCGTGTG GAAGCGAGGG CGGATATCGT CATTTCGACC 
GTTAGCGGTT TAATCATCAT AGAGAACAAG ATAGATGCCT CGGAAGGGGA TAACCAATGC 
CAGCGTCTGT TCGAAGCATT TAGGCGTGAA AATGCCTGGT TTATCTTCTT GACCTCCAAT 
GGTAGGACGC CCTCATCAGC GCCCGCTTGT GTTCGGGCGC ATTTTAGACC CATAAGTTAC 
CGCCAAATAC AGCGATTGCT GATGGCAGCT CTAGAAAGCA GTCCACAAGG TAATCCGGAT 
GCTCCAGGCA GAGCTTCCGC GCGTAGCTAC TTAGCCACTC TTCAAAAAGA GGTGTTATGA
 
Protein sequence
MTPLDEKTFE ALQDEWSHVL ELHKAARRKR IHARVIQWET RLSELKDEQK RLINSGRWVR 
GPADILSVIG KARRELYHSA ILRWLLDPLS PHGLGIKFLR GFLQAAKLPP LVTKLAPEDI 
LSIETEVARV EARADIVIST VSGLIIIENK IDASEGDNQC QRLFEAFRRE NAWFIFLTSN 
GRTPSSAPAC VRAHFRPISY RQIQRLLMAA LESSPQGNPD APGRASARSY LATLQKEVL