| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1565 |
|---|
| Symbol | |
|---|
| ID | 3705784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1740221 |
|---|
| End bp | 1740565 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637738046 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_343575 |
|---|
| Protein GI | 77165050 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGCGG CTATTCGTGT CAGGCACAAC AGCATCCGCG CAGAACAAGC GTATCGGGGT
TGGATCAAGC GCTTCATTTT TTTCTATGGC AAGCGCCACC CTGGCGATAT GGGCAAAGTG
GAGATCAGTG CTTTTTTAAC CCATCTCGCC GTCAAGGGAA AGGTGGCGGC TTCCACGCAG
AATCAGGCGC TCAACGCCAT TCTGTTCTTG TATCGCGGGG GTTTGAAGCA GGACGTGGAA
TGGCTGGATG AGGTGGAACG GGCAAAAAAG CCGTCGCGTC TTCCGGTGGT ATTCACACCC
AACGAGGCAA GAAAAGTCTT GGCGTTGCCG CCACAGGGAA AATAG
|
|---|
| Protein sequence | MRAAIRVRHN SIRAEQAYRG WIKRFIFFYG KRHPGDMGKV EISAFLTHLA VKGKVAASTQ
NQALNAILFL YRGGLKQDVE WLDEVERAKK PSRLPVVFTP NEARKVLALP PQGK
|
|---|
| |