| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1555 |
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| Symbol | |
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| ID | 3705813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1728151 |
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| End bp | 1730070 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738039 |
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| Product | Acyl-CoA dehydrogenase |
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| Protein accession | YP_343568 |
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| Protein GI | 77165043 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0095841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAA CCCCTTTCGG ACAATTAAAG GACATCTCAG AAGCTGATCG CGAGCAAATC
GAAGCAGCTC AGGAAATGCT AGGGCCAGAA CCCGAAACCA TGGGATTTGT GAAAAACCTC
TTTTGGGGTC ATTTCCGGGA GGAATTGCTC TTTCCCTTCC CCGAGGTCAG CCTAGAGGAA
GCCTCCCGTT GCGATCAACT CCTTACTGAA TTAGACGAAT ACCTAAGAAA CGAACACCCC
GCTATCGCCA TTGATCAAGA ACAAAAAATC CCGGCGTCGG TCGTTAAGCG TCTATTCAAT
ATGGGAATTA TGGGAATGAT CGTCCCTAAG AAATATGGCG GGGGAGGCTT TGGTATCACC
AGCTACAACC GAGTTTTATC CCGGATTGGA CAGCGCTGTG GTTCAACTGC GGTTATGGTT
TCCGCCCACC AATCAATTGG TTGTGGCGCC ATTATTCTGT TTGGCACGGA TGCGCAAAAA
AAACGCTTCC TTCCCGCCAT GGCCCAGGAC CATCTCAGCG CCTTTTGCCT TTCCGAGCCT
AACGTAGGCT CGGACGCCAG CGGTCAGGAA ACCCGCTGCA AGCTTTCCGA GGACGGTCAA
TTTTATATCC TGAATGGGGA GAAAAAATGG GCCTCCTCCG CTGCCCTATC GGGCCTTTTT
ACCGTCCTGG CCAAGCAAAA GATCCAGGAC CCCCGGACCG GAAAAGAAAA AGATCAAGTC
ACCGCGCTTA TCTGCACCCC CGATATGGCC GGTATCGATA TCTACTCCCG TAACCGCAGC
AAGTGCGGCA TCCGGGGAAC CTGGCAGGCT AGAATCCGGT TCCGCGACGT GAAAGTCCCC
AGAGAAAACC TTCTCCATCA AGAAGGGAAA GGACTTAACG TCGCCCTCAC TTGCCTAGAC
TATGGCCGCT GTACGCTTGC GGCCGGGATG GTGGGAGCCG CCGCCACAGC CTACGAGCAA
GCGGTAAAGT GGGCTCAATA CCGCTATCAG TTTGGGCGGC CTCTGGCTGA CTTTGAGCAG
ATTCAAGCCA AAATCGCTTC CATGGCAGCT AACTGTTACG CCATGGAAGC CATGCTCTAT
ATGACAACCG GCATGTTGGA TCGCCATGAT GAGGACATCA TGCTAGAGAC AGGAATTTGC
AAAGTCTTTT GCTCGGAAAT AGGCTATCGC GTGGTTGACG ATGCGCTCCA AATCATGGGG
GGCGAGAGCT ATATGACTGA GAATGAGGTG GAGCGCCTGT GGCGGGATAG CCGGATTAAT
CTCATTGTCG AGGGGGCCAA CGAAGTGATG TTAAGTTTTA TTTTTGGCTA TGGCTCAAAA
CAGCTTGGGG AAGCACTCCT CAACATTGCA AAAAATCCCA TGAAGCATTT AGGCCAAGCA
CTACGAATAA GCGCCGAGCT TTTTCTGGGA ATAAAAAAAC AACGGCCCAG GATCACCCGC
CTCCATCCTT CCTTGGCTCC TCTGCAAGGA AAGTTGGAAA ACTATACCCA GCAACTCTCC
CATGAAACCA AGCGCATGTT CCATAAACAT CGAGAAAAAT TGATTACCCG GCAAATGCTC
CAAGCACGCC TCAGTTGGGC CGCCATTTGG ATTCACGCCA TGAGTTGCAG CCTATCTTAT
CTGGATCGTG CTCTTCGCCT AGAAAAGAAA AGAGAACAAA TCGACTCTCA AACAGCACTG
GTAGAGCATT TCTTTAATTT AGCCAGCCGC GCCATTGAAC AGAATTTTCA GGCGCTGAAA
AATAATGCGG ATGATACGCT CCCAGCTGCT GCTAAAGCCG CTTTACGCTA TGCCCATCAG
CTCCCCAACG CCCACTACGT ACTGCCAGAA AAAACCCCGA TCAAAGGAGC ACGAGGGACT
GGCCGCCAAC CGGATCAGAC TCACATTCAG CAATTCGGTT CAGGCTGGCT TACTTTATAA
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| Protein sequence | MAKTPFGQLK DISEADREQI EAAQEMLGPE PETMGFVKNL FWGHFREELL FPFPEVSLEE
ASRCDQLLTE LDEYLRNEHP AIAIDQEQKI PASVVKRLFN MGIMGMIVPK KYGGGGFGIT
SYNRVLSRIG QRCGSTAVMV SAHQSIGCGA IILFGTDAQK KRFLPAMAQD HLSAFCLSEP
NVGSDASGQE TRCKLSEDGQ FYILNGEKKW ASSAALSGLF TVLAKQKIQD PRTGKEKDQV
TALICTPDMA GIDIYSRNRS KCGIRGTWQA RIRFRDVKVP RENLLHQEGK GLNVALTCLD
YGRCTLAAGM VGAAATAYEQ AVKWAQYRYQ FGRPLADFEQ IQAKIASMAA NCYAMEAMLY
MTTGMLDRHD EDIMLETGIC KVFCSEIGYR VVDDALQIMG GESYMTENEV ERLWRDSRIN
LIVEGANEVM LSFIFGYGSK QLGEALLNIA KNPMKHLGQA LRISAELFLG IKKQRPRITR
LHPSLAPLQG KLENYTQQLS HETKRMFHKH REKLITRQML QARLSWAAIW IHAMSCSLSY
LDRALRLEKK REQIDSQTAL VEHFFNLASR AIEQNFQALK NNADDTLPAA AKAALRYAHQ
LPNAHYVLPE KTPIKGARGT GRQPDQTHIQ QFGSGWLTL
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