| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1534 |
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| Symbol | |
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| ID | 3705831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1701995 |
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| End bp | 1702672 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637738019 |
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| Product | cation efflux protein |
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| Protein accession | YP_343548 |
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| Protein GI | 77165023 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAATT GTTGTGAGGA CAAAAGCTGC GAGGTTACCG CCCTCCGGGA ACGTCACGGA
CGCGTATTGT GGATTGTGCT GATTATCAAT CTCGTGATGT TTTTCGTAGA GGGCTGGGCG
GGTCTGTTGG CTCATTCCAC CTCGCTTCTT GCGGATGCCC TTGACATGTT GGGCGATGCC
TTGGTCTATG GATTCAGCCT TTTTGTGCTT GCCCGTTCGG TACGCTGGCA GGCGGGGGCG
GCTCTCGCAA AGGGGGGATT TATGCTTGTC TTCGGCCTTG GCGTACTGGG GGAAGCCACC
TACAAGGTGT TCTATCCTAT TATGCCAGGC GTGGAGATGA TGGGCCTTAT CGGAGGGGTG
GCGCTTGCGG CAAACCTTGT TTGTTTTTTC CTGCTCTACC GCCACCGGAG CGACAATCTC
AACATGCGTT CCACATGGTT GTGCTCCAGA AATGACCTGA TAGCGAATGT TGGTATCTTA
CTGGCTGCCG CGGGTAGCTA TTTACTCGCT TCACGCTGGC CGGATATTCT TGTTGGAAGT
CTCATTGCAA GTCTATTTCT TAGCTCTGCG TTCAGTGTTT TGCGGCAGTC CCTTCAAGCG
CTGCGCGCCC CCCATTCTGA AACCGCGGGA TCGGTCGCTA TTCGTCCATT CAACACCAAC
ACATCCCACA ATGCTTAG
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| Protein sequence | MANCCEDKSC EVTALRERHG RVLWIVLIIN LVMFFVEGWA GLLAHSTSLL ADALDMLGDA
LVYGFSLFVL ARSVRWQAGA ALAKGGFMLV FGLGVLGEAT YKVFYPIMPG VEMMGLIGGV
ALAANLVCFF LLYRHRSDNL NMRSTWLCSR NDLIANVGIL LAAAGSYLLA SRWPDILVGS
LIASLFLSSA FSVLRQSLQA LRAPHSETAG SVAIRPFNTN TSHNA
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