| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1529 |
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| Symbol | |
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| ID | 3705826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1693338 |
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| End bp | 1694741 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738015 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_343544 |
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| Protein GI | 77165019 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC AGACTGCTAT GGTTATTGTT CTGGCCTTTT TAATCGCTCT AGCGATAGGG
GTGGGCGGTG GTTATTGGTA TGCCACTTAT TGGGCACCGA AGACGGCAGC GCCGGTTTCG
GAAACTCCTG CTAAAAAGCC CCTCTTTTAC CGTTCTCCCA TGAATCCGGA AATCACCTCG
CCGGTTCCCG CCAAGGATGC CATGGGGATG GATTACGTTC CCGTTTACGC AGACGAGGAA
GGGAGCGGCA AAGCGCCTGC GGGTACGGTG AAAATCGACC CGGTTATTGT ACAGAATATT
GGGGTGCGGA CTACCACGGC GGAGCGCCGC ACCCTGACCC GTACGATACG GGCGGTGGGG
CGGGTCGATT ACAATGAAGA ACTCCTGGCG CGGCTTCATC CCAAAATCGA GGGCTGGGTG
GAGAAGCTGT TTGTCGACAA AACGGGCGCC AAGGTACAGA AAGATGAGAT GTTGCTCAGT
CTCTATTCAC CGCAATTGGT AGCCACTCAG CAAGAATATC TCCTCGCCCT GCGCAACCGG
GAAACACTTG AAATGAGCCC CTATCCAGAT ATTCGGCAAG GGGCGGAAGA ATTGGTCCAG
AGCACCCGGG AGCGGCTGCA ATTATTGGAT GTGCCGGAAC ATCAGATCCG CGAGTTGGAA
CAGGCCGAAA AAATTTATAA GAATCTGCAT ATCCATTCTC CTTTTCATGG GGTTGTGCTC
CAAATTGGTG TTCGTGAAGG CCAATATGTG ACCCCCCAAA CGGAGCTCTA TACCTTGGCC
GATCTTTGTC AAGTGTGGGT TTATGTGGAC ATTTATGAGT ATGAACTGCC TTGGGTCCAG
GCCGGCGATG AAGCCGAGAT GCGCGTTACT GCCATTCCCG GCCAAGTTTT TCACGGTACG
GTCGCTTATA TTTATCCCTA TCTGGAGAAA CAAACCCGCA CTGTTCAATT GCGTCTGGAA
TTTGATAATT CTGATCTCTT GTTGAAGCCG GAGATGTTCG CCAATGTGAC CATTCATGCC
AGCAAGCAGG TGGACGCAGT GGTGGTGCCG GAGGCAGCCA TTGTCCGCTC CGGCACCCGG
GAGCAGGTGT TCGTCGTGCG TGGGCCCGGC AAATTTGAAC CTCGGGAGGT GAAGGTGGGG
GTCTCAGCCG AGGGTTTCAC CGAAATTTTG GCGGGACTCA AACCTGGCGA GAAGGTGGTG
ACCTCAAGCC AGTTTCTCAT CGACTCCGAG TCCAAGCTGC GGGAGGCTAC CGCCAAAATG
AAAGAACCCA AATTAGGGGC GATAAACGCT GAAAAACAGG AAGAGGATGC CGGCAAACAT
AAACAGAGGA TAACGCCTAA GGGGAGTCCT GCCAAGGATA ATCATACCCC CCACACCCAT
TCAGCCCCTG AGGAGGTAAG ATGA
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| Protein sequence | MSKQTAMVIV LAFLIALAIG VGGGYWYATY WAPKTAAPVS ETPAKKPLFY RSPMNPEITS
PVPAKDAMGM DYVPVYADEE GSGKAPAGTV KIDPVIVQNI GVRTTTAERR TLTRTIRAVG
RVDYNEELLA RLHPKIEGWV EKLFVDKTGA KVQKDEMLLS LYSPQLVATQ QEYLLALRNR
ETLEMSPYPD IRQGAEELVQ STRERLQLLD VPEHQIRELE QAEKIYKNLH IHSPFHGVVL
QIGVREGQYV TPQTELYTLA DLCQVWVYVD IYEYELPWVQ AGDEAEMRVT AIPGQVFHGT
VAYIYPYLEK QTRTVQLRLE FDNSDLLLKP EMFANVTIHA SKQVDAVVVP EAAIVRSGTR
EQVFVVRGPG KFEPREVKVG VSAEGFTEIL AGLKPGEKVV TSSQFLIDSE SKLREATAKM
KEPKLGAINA EKQEEDAGKH KQRITPKGSP AKDNHTPHTH SAPEEVR
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