| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1520 |
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| Symbol | |
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| ID | 3705856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1685310 |
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| End bp | 1686491 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637738006 |
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| Product | transposase |
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| Protein accession | YP_343535 |
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| Protein GI | 77165010 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC CGGATTCTAG CAAAATACAG CGAAGCTACA AGTTTCGCTT CTACCCCACC
AGCGTCCAGC GCCAGCAATT GGCGATTGAG TTTGGCCATG CCCGCTGGGT GTGGAATACC
TGTCTGACCT GGCGGGGCCA TCAATACAGG GTTCACGACA AATGCGTTAG CGGTGTTGAT
TTTAGCCGCC AGCTCACGTT TCTAAAAAAG CTAGGGGCTT ACGGTTGGCT GGGCGAGGCG
ACCCGCGATT GCCTCATGCA AAAGCTCCGC GACCAGGACA CGGCCTTCAG GAACTTCTTT
GCGGGTCGGG CCAAGCATCC AAAGTTCAAA AAAAGGGCGC ATACCCAAAG CATCCGCTAC
TGCTTCGATC ATCGCCACAG GGGCAAGATA AAAGCGTGGA TGGCGGGGCA ATTGGTTCTG
CCCAAGCTCG GGGCGCTCAA GCTCAAGTGG TCCCGCAGGC CCCAGGGCAT CCCCAAGATG
GTGACGGTCA CCCAGGACGG TGCGGGTCGT TATTTTATCT CCTTCATGTG CGAAGAGACG
ATCCAGCCGC TGCCGCGAAA GCCAAACGGT ATCGGCGTGG ATCTCGGCGT GAAGGATATT
GTCGTGACTT CCGAGGGTTG GAAGTCCGGT AATCCTCGCC ACCTACGCAC TTATCGGCGT
CTACTCACCA AAACTCAGCG TCGGCTCTCT CGCAAAGTCA GAGGTAGTGA TCGTTGGCGC
CGCCAGCGAG TAAGGGTCGC CAAGGCCCAC GCCAGGGTGA GCAATACCCG TCAGGATTGG
CTGCATAAGC TCAGCACGGC ACTGATTCGC CAGGCTGGTT TCATCGCCAT GGAAGATTTG
AACGTCAGGG GCATGATGGC CAATAGACGG CTATCCAAGG CATTGGGCGA TGTGGGCATG
CACGAACTTA AACGCCAATT GGAATACAAG GCTAAGTGGT ATGGCCGAGA GTTTGTGCAA
GTGGATAGGT GGGCGCCCAC CAGTAAAACG TGCTCGGCGT GTGGCACAGT GCAAAAAGCC
ATGCCGCTCA ATGTTCGCGA GTGGACTTGC CCGGACTGTA AGTCAGTCCA CGACCGCGAT
ATTAACGCGG CCCGGAATAT TTTAAGGTTA ACTACGGTTG GGAGGACCGG AAGTGATGCG
CGTGGAGGAG TATACCAACC GGAGGTGGCT TATGGCTGCT AA
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| Protein sequence | MTEPDSSKIQ RSYKFRFYPT SVQRQQLAIE FGHARWVWNT CLTWRGHQYR VHDKCVSGVD
FSRQLTFLKK LGAYGWLGEA TRDCLMQKLR DQDTAFRNFF AGRAKHPKFK KRAHTQSIRY
CFDHRHRGKI KAWMAGQLVL PKLGALKLKW SRRPQGIPKM VTVTQDGAGR YFISFMCEET
IQPLPRKPNG IGVDLGVKDI VVTSEGWKSG NPRHLRTYRR LLTKTQRRLS RKVRGSDRWR
RQRVRVAKAH ARVSNTRQDW LHKLSTALIR QAGFIAMEDL NVRGMMANRR LSKALGDVGM
HELKRQLEYK AKWYGREFVQ VDRWAPTSKT CSACGTVQKA MPLNVREWTC PDCKSVHDRD
INAARNILRL TTVGRTGSDA RGGVYQPEVA YGC
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