Gene Noc_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1503 
Symbol 
ID3705839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1666762 
End bp1668267 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content55% 
IMG OID637737990 
Productbinding-protein-dependent transport system protein 
Protein accessionYP_343519 
Protein GI77164994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTA AGCTTTCTTC CCGTGGTTTA GAAGAAAAAC GCACCCTTTG GATCGTGCTG 
GCTATCGTGC TCCTGTTTGC CCCTTTGTTT CGGGCCGGGA ACAGGCCACT ACCCCTGATG
ATCCTGGAGT TGGCGGCCTT GGTGCTGCTC GCTCTATTTT GGATTCAGTG GAAAAAACAG
CGGTCCATCA GCGTTGCCGA GACCGTCATG GTGGGGGGGA TTTTGCTTAT CCCCTTACTC
CAGCTCATCC CTTTGCCCCC ACAATTCTGG GCCGAGTTTC TCCCCGGGCG GGCCTTTTAC
GCCGACGGGC TTCGCCATGC CCTGGGGGAG CAATTTTTTT CCGGGCACTG GCGTCCCCTG
GCCCTCATTC CCTCCTACGG AGAGGCCGCC TGGCTAGCCT TGCTTCCTCC GGTGGCGGTT
TTTCTGGCCG TCCGGAGTTT GTCTTCTCAG CAGCTACAGA GGCTGATCTA TTTATTTTTA
GCCATGGCTA CGTTCCAGGC CGTGCTGGGG TTAATTCAAT ACGGCGCGGG TCCAGAAAGC
ATCTTTCGTT TAGGCAATCA ACATTATAGA GACAGCGCGG TAGGCACGTA TGTCAGCCGC
AATCACCTGG CGGGCCTGCT GGAAATGGCC TTGCCCCTTG CCCTGGCGCT CCTTATGGCG
ACGGTGGGGC AATCATCCCA ACTTGCCTAT CAGCGGGGGG GATGGCGCCA GCGCCTGCTA
GCCTGGGGCA ACCGGCGGGG CAATCGTTCC ATGCTGTATG CCGCCATAGC CCTGGTGATT
TTGCTGGGTA TCATATTTAC CCGTTCCCGG GCGGGTATTC TGTTGGCCAT GGTGGGACTC
TTTCTAAGTT TTCTGGCCTT TGCGGGAAAA ATTGGCAATC GAAAAACCTA CGGTACAGTG
GGGGTGCTCG TCTTCGCGGG GTCGATACTA GCGATAGAAA TTGGGCTTGC CCCGGTCTTC
AATCGTTTCG CGGCCTTGGA TGAGCCCATG CAAGAGGGGC GTTGGGGGAT TTTTTCCGGG
ACACTGGGCG CCATTGGCGA GTTTTTTCCT GTTGGAAGCG GCAGTGGAAG TTTCGCGGCA
GTCTTCCAAC GTTTTCAGCC GGCGGATTTC GTGGGTGGAT TCGTTCACCG GGCGCACAAT
GATTATCTGG AGTGGCTCCT GGTAGGCGGG TTACCGGTTG CCGTCCTTAT TATCGCCGGC
CTTTTGCTCT ACTTTTGGCA GTGGTTCAAA GTCTGGCGTG GTAACCATGA TTCCAGCTTC
TCTTTTATTC AGATAGGAGC GGGGATAGGG CTGCTCCTGC TGCTGCTCCA TACCCTGGTG
GACTTTAATC TCCATATTCC CGCCAACGCT ATTTTTTTTG CTTTTCTCCT GGGAATCTTT
TTTCATCCGC CAAAAGCGCG GGAGCGCAGG CGGCAAAAAG AAACAATATT GTCAGTGGCA
GAGGCCATGC CCTTGAAGCT GCGGGAAATA CCACCGGAAA ATCAGGTCAA TCCTTTTGCT
GGATGA
 
Protein sequence
MSPKLSSRGL EEKRTLWIVL AIVLLFAPLF RAGNRPLPLM ILELAALVLL ALFWIQWKKQ 
RSISVAETVM VGGILLIPLL QLIPLPPQFW AEFLPGRAFY ADGLRHALGE QFFSGHWRPL
ALIPSYGEAA WLALLPPVAV FLAVRSLSSQ QLQRLIYLFL AMATFQAVLG LIQYGAGPES
IFRLGNQHYR DSAVGTYVSR NHLAGLLEMA LPLALALLMA TVGQSSQLAY QRGGWRQRLL
AWGNRRGNRS MLYAAIALVI LLGIIFTRSR AGILLAMVGL FLSFLAFAGK IGNRKTYGTV
GVLVFAGSIL AIEIGLAPVF NRFAALDEPM QEGRWGIFSG TLGAIGEFFP VGSGSGSFAA
VFQRFQPADF VGGFVHRAHN DYLEWLLVGG LPVAVLIIAG LLLYFWQWFK VWRGNHDSSF
SFIQIGAGIG LLLLLLHTLV DFNLHIPANA IFFAFLLGIF FHPPKARERR RQKETILSVA
EAMPLKLREI PPENQVNPFA G