Gene Noc_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1500 
Symbol 
ID3705991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1664390 
End bp1664803 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content55% 
IMG OID637737987 
Producttransposase IS200 
Protein accessionYP_343516 
Protein GI77164991 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.864128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGTGC AAGAAGATTA TCGACGAGGC CGACACAGCG TTACGCGGCT TGTCGTCCAT 
CTCGTTTTCA CAACGAAGTA CCGAGGCAAG GTCTTCGATG GCTATATACT CGGGCAGCTA
CGAGAGGCGT TTGAGTCAGC TTGCGAGAAA CTCGATTGCC GCATCCTTGA GTTCGATGGC
GAGGAAGACC ACGTCCATTT GCTCGTGGAA TACCCGCCAA AGCTGTCGAT CAGCGTGTTG
GTCAACAACT TGAAGTCCAC CTCATCCCGG CGCGTGCGCT TGTTGAATAC CCACCTCCCG
AACTTGAGCA AGAGCGCCGC GCTGTGGTCG AGATCGTATT TCGCTTGTAG CGCGGGCGGG
GCAACTATCG AGACACTTAA AGCCTATGTG CAAAGCCAGA AAACACCCGA CTAG
 
Protein sequence
MSVQEDYRRG RHSVTRLVVH LVFTTKYRGK VFDGYILGQL REAFESACEK LDCRILEFDG 
EEDHVHLLVE YPPKLSISVL VNNLKSTSSR RVRLLNTHLP NLSKSAALWS RSYFACSAGG
ATIETLKAYV QSQKTPD