Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1500 |
Symbol | |
ID | 3705991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1664390 |
End bp | 1664803 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737987 |
Product | transposase IS200 |
Protein accession | YP_343516 |
Protein GI | 77164991 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.864128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGTGC AAGAAGATTA TCGACGAGGC CGACACAGCG TTACGCGGCT TGTCGTCCAT CTCGTTTTCA CAACGAAGTA CCGAGGCAAG GTCTTCGATG GCTATATACT CGGGCAGCTA CGAGAGGCGT TTGAGTCAGC TTGCGAGAAA CTCGATTGCC GCATCCTTGA GTTCGATGGC GAGGAAGACC ACGTCCATTT GCTCGTGGAA TACCCGCCAA AGCTGTCGAT CAGCGTGTTG GTCAACAACT TGAAGTCCAC CTCATCCCGG CGCGTGCGCT TGTTGAATAC CCACCTCCCG AACTTGAGCA AGAGCGCCGC GCTGTGGTCG AGATCGTATT TCGCTTGTAG CGCGGGCGGG GCAACTATCG AGACACTTAA AGCCTATGTG CAAAGCCAGA AAACACCCGA CTAG
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Protein sequence | MSVQEDYRRG RHSVTRLVVH LVFTTKYRGK VFDGYILGQL REAFESACEK LDCRILEFDG EEDHVHLLVE YPPKLSISVL VNNLKSTSSR RVRLLNTHLP NLSKSAALWS RSYFACSAGG ATIETLKAYV QSQKTPD
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