| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1474 |
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| Symbol | |
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| ID | 3706004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1634128 |
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| End bp | 1634694 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737961 |
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| Product | ECF sigma factor |
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| Protein accession | YP_343490 |
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| Protein GI | 77164965 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGATA CCGATCTCAT CGACAGGGTA GCCCGGGCCG ATCCCAAAGC CCTCGGCCAT
CTATACGACT GCTATGCCCC GCTCCTTCTC GCGGTGGGCC TGGGCATACT CAGTAATCGC
CAAGAAGCTG AAGATGTGCT GCATAATGTT TTTATGGAAA TTTGGCGCAA GGCCAGTCAA
TACGATGGAC GCCGCGGCTC CGTTCGCGCC TGGTTGATAT TACGGATGCG CTCCCGATCC
CTGGACCGCC TCCGCTCGGC GCCCTATACC CGATCAATAC CCATACCGGA AACAGTATTG
GAAAACACAG CGAATGGAAT GTCCCAAGAT CCTGCCCTTG CATGGGACTG CCAGGCAGTA
CGCAAGGCCA TGTCGAAGCT CAGCAGGGAG CAACGTACTA TTATGGAACT GGCCTATTTT
CAGGGTTTGT CGGCAAGCGA AATCGCTTCC CATGTCGGAC TTCCTTTAGG AACTATCAAA
AGCCGGATGC GGGGGGCGCT AAATGTGCTT CGAACCCATT ACAGAACGCA ATGTCAGAGG
ATATCGAATG AAACGGAAGG AAAATAA
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| Protein sequence | MDDTDLIDRV ARADPKALGH LYDCYAPLLL AVGLGILSNR QEAEDVLHNV FMEIWRKASQ
YDGRRGSVRA WLILRMRSRS LDRLRSAPYT RSIPIPETVL ENTANGMSQD PALAWDCQAV
RKAMSKLSRE QRTIMELAYF QGLSASEIAS HVGLPLGTIK SRMRGALNVL RTHYRTQCQR
ISNETEGK
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