| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1468 |
|---|
| Symbol | |
|---|
| ID | 3705998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1628245 |
|---|
| End bp | 1629123 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637737956 |
|---|
| Product | Pirin-like protein |
|---|
| Protein accession | YP_343485 |
|---|
| Protein GI | 77164960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCAAGGCAT TTATAGTGCC CCGCAACAGC ACTGGGTAGG CGACGGATTT
CCTGTCCGTT CATTGTTTTC CTACCGCAAT CAGGGAGAGC AATTGAGTCC ATTTCTGCTC
CTTGACTATG CTGGCCCCAT GGAATTCGAT CCGGCGAAGC GCCCGCGGGG CGTGGGCGAG
CATCCTCACC GGGGCTTTGA GACCGTCACC ATCGTCTACC AGGGTGAGGT CGCCCACCGT
GACTCCACGG GAGCCGGCGG CAAGATAGGA CCCGGTGATG TGCAGTGGAT GACCGCCGCC
TCCGGCATAC TCCACGACGA ATTCCACTCG CCCGAGTTCA CGGGCGCCGG TGGTACCTTG
GAAATGGTCC AGTTGTGGGT GAATTTGCCA GCCAAGGACA AAATGTCGCC ACCAAAGTAC
CAGACTCTGT TGGACAAGGA CATTCCGGCG GTAGAACTCC CGGAGGAGGG AGGCCAGGTG
CGGGTGATCG CCGGTGAATA CAGGGGCCAC CGGGGTCCGG CGGCTACCTT TACGCCCATG
AATGTATGGG ACGTGCGGCT GAATCCCGGC CACTCCGTTG ACTTCGCCAC GCCGGAAGGG
CACACCCTGG CGCTGGTTGT CTTGCACGGC AATGTGCGGG TCAACGCCAG TGAGACCGTC
CGTGAGGCGC AGTGGGTATT GCTGGAGCGA GCAAATCGTA CCGTTTCCCT GGAGGCGAGC
ACCGAGGCCA CATTGCTGCT GCTGAGCGGT GAGCCCATCA ACGAACCGCT GGTAGGCCAC
GGACCCTTCG TGATGAACAG TGAGGCCGAA ATTCAACAGG CGATGGAAGA TTTCAAGCGT
GGCCGTTTTG GCCGTCTAGC GTCAGTGGCG GCTGTTTGA
|
|---|
| Protein sequence | MKKIQGIYSA PQQHWVGDGF PVRSLFSYRN QGEQLSPFLL LDYAGPMEFD PAKRPRGVGE
HPHRGFETVT IVYQGEVAHR DSTGAGGKIG PGDVQWMTAA SGILHDEFHS PEFTGAGGTL
EMVQLWVNLP AKDKMSPPKY QTLLDKDIPA VELPEEGGQV RVIAGEYRGH RGPAATFTPM
NVWDVRLNPG HSVDFATPEG HTLALVVLHG NVRVNASETV REAQWVLLER ANRTVSLEAS
TEATLLLLSG EPINEPLVGH GPFVMNSEAE IQQAMEDFKR GRFGRLASVA AV
|
|---|
| |