| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1458 |
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| Symbol | |
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| ID | 3706027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1614546 |
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| End bp | 1615649 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637737947 |
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| Product | WD-40-like beta propeller repeat-containing protein |
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| Protein accession | YP_343476 |
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| Protein GI | 77164951 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0940503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTTG GAGGTAAATT CATGCGAGAC ATCAATACTG TCGCTTCCAG TTGGCTCCTA
GTGGCGACGC TCTGCGCGGG CGCTGCTGGG GCTATCGCGG CAGAACCCAC TAACAGTCCC
GCTTCCCCGA CGGAGGAGCT TCGCTATCCC GGCGAAAAGC ACCTGACCCA TCTCCGTCAA
CTTACCTTTG GCGGCCAGAA CGCCGAAGCT TATTTTTCTT TTGACGGCAA GGAGCTGATT
TTTCAGTCTA CCCGTGACGA TTTGAAGTGC GACGCTATCT TCCGTATGGA TGCGGATGGC
AAGAATGTCC GCCAGGTCTC CTCTGGCAAA GGGGTGACCA CCTGCTCATT TATTGCCCCG
GACGACCAGG CCATTATCTA TGCCTCTACT CATCTGGCGG GCGACCAGTG TCCCCCCAAA
CCTGACTACT CCCAAGGCTA CGTCTGGCCC TTGTACGAGG GCTATGACAT TTTCCGGGCT
GATCCGGAAG GCGGCAATCG GGTGCGCCTG ACCGACACCC CTGGCTACGA TGCCGAGGGA
GTTTACTCTC CCAAGGGGGA CAAAATTATC TTTACGTCAG CCCGCACGGG GGATCTGGAA
CTGTTCATGA TGAACCCGGA CGGCAGCGAG GTGGAACAGC TCACTGATCA ACCCGGCTAC
GATGGCGGGG CCTTTTTCTC CCGGGATGGT CAATGGATCG TCTGGCGCGC CTCCCGTCCC
GAAGGTAAAG CCCTGGCCGA TTATCAAAGC TTGCTCAAAC AAGGACTCAT CCGTCCTAGC
CAACTGGAAA TTTTCATCAT GAACCTAGAG GAACGCAAAC CTATCCAGCT CACCGACAAT
GGCGCCGCCA ACTTCGGCCC CTATTGGCAT CCGGATGGCA AGCACATCAT CTTCTCCTCC
AACATGCACA ATCCCAAAGG CCGCAACTTT GATCTGTTCC TGATTAACGT GGATACCCGG
GAAATCGAGC AGATCACTCA TCATCCTGAT TTCGATGGCT TTCCCATGTT CTCCCACGAT
GGCAAAAAGC TGGTATTTGC CTCCAACCGC AACGGCAAGG TGGAAGGGGA AACCAATGTC
TTCATGGTAG ATTGGCGCTG GTAA
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| Protein sequence | MTLGGKFMRD INTVASSWLL VATLCAGAAG AIAAEPTNSP ASPTEELRYP GEKHLTHLRQ
LTFGGQNAEA YFSFDGKELI FQSTRDDLKC DAIFRMDADG KNVRQVSSGK GVTTCSFIAP
DDQAIIYAST HLAGDQCPPK PDYSQGYVWP LYEGYDIFRA DPEGGNRVRL TDTPGYDAEG
VYSPKGDKII FTSARTGDLE LFMMNPDGSE VEQLTDQPGY DGGAFFSRDG QWIVWRASRP
EGKALADYQS LLKQGLIRPS QLEIFIMNLE ERKPIQLTDN GAANFGPYWH PDGKHIIFSS
NMHNPKGRNF DLFLINVDTR EIEQITHHPD FDGFPMFSHD GKKLVFASNR NGKVEGETNV
FMVDWRW
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