Gene Noc_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1447 
Symbol 
ID3706016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1604219 
End bp1604698 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID637737937 
Producthypothetical protein 
Protein accessionYP_343466 
Protein GI77164941 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATT CCAACATATC TCAAAATAAC GGAGTCAAGA GCACCGCATC CATTGCGGGA 
CACCCCATTC ACCCGATGTT GATTCCATTC CCCATAGCCT TTCTAGTTGG CGCTTTATTA
ACCGATATAG CCTACCTTGC AACAGCCGAT TTTTTCTGGG CCAGAGCCTC GCTTTGGTTA
ATCGGCGGCG GTTTTATTAC TGGAGCACTG GCCGCTGTTT TTGGCCTAAC TGATTTTCTT
ACTATCCCAA AGATTCGGGC GCACAAAGCT GCTTGGATTC ATTTTCTCGG TAATGCGACC
GTATTGCTGT TGGCGCTGGC TAATTGGCTA ATGCGTTTAA CCGAAATGAC TACCCCAATC
CTCCCCTGGG GCTTATCTCT TTCCGCGCTC ACCGCGGCTA TTTTACTGGT GACAGGGTGG
TATGGAGGCG AGTTATCCTA CCGGCATAAA ATCGGTGTGA CCGGACATAC AATTAAGTAG
 
Protein sequence
MANSNISQNN GVKSTASIAG HPIHPMLIPF PIAFLVGALL TDIAYLATAD FFWARASLWL 
IGGGFITGAL AAVFGLTDFL TIPKIRAHKA AWIHFLGNAT VLLLALANWL MRLTEMTTPI
LPWGLSLSAL TAAILLVTGW YGGELSYRHK IGVTGHTIK