Gene Noc_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1439 
Symbol 
ID3706047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1596091 
End bp1597065 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content54% 
IMG OID637737929 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_343458 
Protein GI77164933 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG CAACCTTGAA TAATGGGACT CGGGATGGGA GTTTGATAGT CGTGAATCGG 
AATCTTCAGT GGGCCGCTCT GGTGCCCCAT ATCGCGACTA CCCTCCAAGG GGTTCTGGAT
GAATGGGACA GCAAGGCTCC CCGACTCGAG GAAACCTACC GGTCTCTTAA TAAGGGGGAA
ATCAAGGGTT TCTCCCTGCC ACCGGCGCGA CTGGCTGCTC CTTTCCCGCG TGCTTACCAA
TGGTTGGATG GGAGCGCTTA TTTAAGCCAC GTGGAGCGGG TGCGCAAGGC TCGGGGCGCT
GAGATGCCCC AGAGCTTTTG GACCGATCCC CTCATGTATC AAGGGGGATC GGATTATTTT
CTGGGTCCAC GGGAATCCAT TCGGGTAATG GACGAAGCCT TTGGGGTGGA TTTTGAAGCC
GAGGTGGTAG TCATTACCGA TGATGTGCCT CTTGGGATTA CACCTGCCCA CGCCTCCTCC
CATATCAAGC TGCTTACCCT GGTCAATGAT ATTTCCCTGC GCCACCTCAT CCCCGCGGAG
CTGGCGAAAG GATTTGGTTT TGTGCAGGGC AAGCCCGCCA GCGCTTTGGC GCCGGTGGTG
GTGACCCCGG ATGAACTAGG AGAAGCTTGG GATGGGGCGA AAGTCCATCT GCCTTTGCGG
ACTTATTGGA ATGGAAAGTT GTTCGGGGAG CCGGAGGCGG GTGAGGATAT GCAATTTGAT
TTTCCCCAAT TGATTAGTCA TGCGGCTAAA ACCCGCTCTT TGAGTGCCGG CACTCTTATT
GGATCGGGCA CCGTATCCAA TGTTGATTGG AGGCGAGGTT ATTCCTGTAT TGCTGAATGC
AGGGTAATGG AAATCATTGC TAGGGGGAGC GCGGCAACCC CCTTTATGAG CTATGGGGAT
CGAGTCCGTA TTGAGATGGA GGATAGACAC GGAAGATCCA TTTTTGGGGC CATTGAGCAG
GAAGTCTCCC GATAG
 
Protein sequence
MKLATLNNGT RDGSLIVVNR NLQWAALVPH IATTLQGVLD EWDSKAPRLE ETYRSLNKGE 
IKGFSLPPAR LAAPFPRAYQ WLDGSAYLSH VERVRKARGA EMPQSFWTDP LMYQGGSDYF
LGPRESIRVM DEAFGVDFEA EVVVITDDVP LGITPAHASS HIKLLTLVND ISLRHLIPAE
LAKGFGFVQG KPASALAPVV VTPDELGEAW DGAKVHLPLR TYWNGKLFGE PEAGEDMQFD
FPQLISHAAK TRSLSAGTLI GSGTVSNVDW RRGYSCIAEC RVMEIIARGS AATPFMSYGD
RVRIEMEDRH GRSIFGAIEQ EVSR