| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1418 |
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| Symbol | |
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| ID | 3706065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1571499 |
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| End bp | 1574687 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737908 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_343437 |
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| Protein GI | 77164912 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.765902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTACCC GTATTCTAAA ATTTTCTGTT CAGCAGCGTT GGCTAGTGTT ATTAGCCACC
TTCGGGGTAG CCGTGCTGGG GATTTATAAT TACCAGCGCC TACCCATCGA CGCTGTCCCC
GATATCACCA ATGTGCAAGT TCAGATCAAC ACCGAAGCGC CAGGCTATTC GCCCCTTGAG
ACGGAGCAGC GCATTACTTT TCCCCTTGAG ATTACCCTGC AAGGGCTTCC CCAGCTAGAG
GAGACCCGTT CCCTCTCCCG TTATGGGCTT TCCCAGGTGA CCGTTATTTT TGAGGACGGC
ACCGATATCT ATTTTGCCCG TCAGTTGGTG AATCAACGCA TCCAGGAAGC TAAGGGCAAC
CTTCCGCCAG GCATCGAGCC TAAGATGGGT CCTATCGCCA CGGGACTGGG CGAAATTTTT
CTCTGGACGG TGGAAGCGGA ACCTGGCGCC CGCAAGCCAG ATGGCGCCCC TTATACTTTC
ACCAGCTTGA GAACTATCCA GGATTGGGTG ATCAAACCCC AATTGATCAC CGTCCCAGGG
GTAACCGAGA TCAACAGCCT GGGAGGGTAT ATTAAGCAGT ATCACGTCAC CCCCTACCCG
AAAAAACTTA TCGCCTATGG TCTCTCCTTC CGGGATTTAC TCACCGCCCT GGCCCGCAAT
AATGCCAATG TAGGCGCAGG CTATATTGAG CACCATGGCG AGCAGTATCT GATTCGGGCT
CCAGGGCAAG TACAAAACTT AGAGGAAATA AGCCATATCA TCGTGGGCGC CCATCAGGGC
GTTCCGGTAT ACGTCAAGGA TGTGGCCGAT GTGCTGCTCG GAAAAGAATT GCGTACCGGC
GCAGCCACCC GGGAAGGGGA AGAAACCGTG CTAGGGACCG CCTTCCTGCT CATGGGGGAA
AATAGCCGGA CGGTGGCCCG TGCGGTCGCG GAGCGGTTGG CGGAAATTAA CCGCACCCTG
CCCGAGGGCG TGGAGGCAAA AAGCGCTTAT GATCGCACCA TTCTGGTAGA TAAAACCATT
GCCACGGTGA GAAATAACTT GCTGGAGGGG GCAGCGCTAG TGATTGCCGT GCTCTTCCTC
TTTTTGGGAA ATTTCCGCGC TGCTCTAATC ACCGCCATGG TGATCCCCCT GTCCATGCTG
TTCACCATCA CCGGCATGGT CACCGAAAAG GTCAGCGCCA ATCTCATGAG CCTGGGGGCG
CTGGATTTTG GCATTATTGT GGACGGGGCC GTGGTCATCG TCGAGAATAG CATCCGGCAT
TTGGCGGAGG CACAACAGCG CCGAGGACAT ACCCTATCGC TATCAGAACG GTTGGAGGTG
GTATTCCATT CCTCCGAGGA AGCCCGCCGG GCGATTCTCT ATGGACAAAC CATTATCATG
GCCGTATATC TCCCCCTCTT TACCCTAACC GGGGTGGAGG GGAAGATGTT CCATCCTATG
GCCTTCACGG TTGTGGCCGC CCTGTTCGGG GCCATGATCC TCTCGGTCAC CTTTGTCCCT
GCGGCGGTAG CCATTTTCGT CAATGGGCCT ATCGCCGAAA AAGAAAATCC CGCCCTGGCG
CTAGCTAAAA AAGCTTATCG GCCAGCACTG CATTTTACCC TCAACAACAA AATAGTAGTC
ATCACCCTCG CGGCGATAAT AGTGGTGCTC AGTGGGCTAC TGACAACCCG CATGGGCGCT
GAATTTGTGC CTACCCTAGA TGAAGGGGAC ATGGCGGTAC AAGCCATTCG GGCTACCGGA
ACCAGCCTCT CCCAGTCGGT GGAGATGCAA CGCGCGCTGG AGGAAAAGAT CATGGCATTT
CCCGAGGTAA AAACCGTCGT TGCCCGGATT GGAACCGCGG AAATTGCCAA TGATCCCATG
CCTCCCAATG TCGCCGATAC CCTGATCATG CTCAAACCGA GGGCGGAATG GCCGAACCCG
GAGCGCCCAA AAACCGACTT ACTCCAGGCG ATGGAAGCCA GCATCACTCA ACTTCCCGGT
AACAAATACG AGTTTACTCA GCCCATCGAG CTGCGTTTCA ATGAGCTTAT TTCCGGCGTG
CGGGCGGATA TTGCAGTCAA AGTTTTCGGC GATGATATGG CTACCTTGCT TAACACGGGT
GAGCGCATTG CAGCAGTGCT GAAAACCGTC CCTGGAGCGG CGGATGTCCG GGTGGAACCG
ATAACGGGTT TGCCCGTGGT TACCGTGCGG ATGAAACGGG AAAAGATGGC CCGCTATGGG
TTCAATGTGG CTGACGTCCA AGCAGTCATT ACCGTCGCGC TGGGAGGAAA AACCGCTGCC
GGGGGGGATA GTACGGGGAT GATCTATGAA GGGGATCGCC ATTTTCCCCT GGTGGTTCGC
CTTCCCGAGG ACTTGCGTAG TAATCTTAAG ACCTTAAAGC GTCTCCCGCT CCCCCTTCCC
TCCAGGGGAT CGGCATCACA GCAATTCCCC TTGCAGGGCG CGGCAGGGGT ACCTCTTCGC
CCCAGCTATA TTCCCCTCAG TACCGTGGCG ACTTTGGAAA TCACTCCCGG ACCCAATCAA
ATTAGCCGGG AGAATGGCAA ACGCCGGCTG GCTGTCACCA CTAATGTTCG CGGCCGCGAC
CTAGGCTCCT TTGTGGCGGA AGCTCGGAGC AAAATCCAGG CGCAAGTTAA GATCCCCCCA
GGCTACTGGA GCACCTGGGG CGGCCAGTTT GAACAAATGA TCGCCGCCGC TAAGCGCCTC
GAGATTGTCG TCCCCATCAC CCTCCTCCTT ATTTTTATCC TCCTCTATAG GACCTTTGGC
ACCCTTAAGG ATGGCCTGCT AGTCTTTACC GGCGTCCCCT TCGCCTTGAC CGGCGGGATA
GTATTTCTTT GGCTGCGGGA TATTCCCCTT TCCATCTCTG CAGGCGTAGG CTTTATCGCC
CTTTCCGGCG TGGCGGTGCT CAATGGCTTG GTCATGATCG CCTTTATTAA AAAACTGCGC
GAGGAGGGTT TACCCCTGGA GGAGGCCGTT CGGCAAGGGG CCCTGACCCG CCTGCGCCCG
GTGCTAATGA CAGCCTTGGT GGCCGCCCTG GGCTTTATCC CCATGGCCCT GGCCACTAGC
ACTGGAGCAG AAGTGCAACG CCCCCTGGCT ACCGTGGTCA TTGGGGGCAT CCTTTCTTCT
ACGCTTCTCA CCCTGCTGGT TCTGCCTGCC CTCTATGAAT GGGTTCACAC AAACCGATCT
AGCCGATAG
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| Protein sequence | MFTRILKFSV QQRWLVLLAT FGVAVLGIYN YQRLPIDAVP DITNVQVQIN TEAPGYSPLE
TEQRITFPLE ITLQGLPQLE ETRSLSRYGL SQVTVIFEDG TDIYFARQLV NQRIQEAKGN
LPPGIEPKMG PIATGLGEIF LWTVEAEPGA RKPDGAPYTF TSLRTIQDWV IKPQLITVPG
VTEINSLGGY IKQYHVTPYP KKLIAYGLSF RDLLTALARN NANVGAGYIE HHGEQYLIRA
PGQVQNLEEI SHIIVGAHQG VPVYVKDVAD VLLGKELRTG AATREGEETV LGTAFLLMGE
NSRTVARAVA ERLAEINRTL PEGVEAKSAY DRTILVDKTI ATVRNNLLEG AALVIAVLFL
FLGNFRAALI TAMVIPLSML FTITGMVTEK VSANLMSLGA LDFGIIVDGA VVIVENSIRH
LAEAQQRRGH TLSLSERLEV VFHSSEEARR AILYGQTIIM AVYLPLFTLT GVEGKMFHPM
AFTVVAALFG AMILSVTFVP AAVAIFVNGP IAEKENPALA LAKKAYRPAL HFTLNNKIVV
ITLAAIIVVL SGLLTTRMGA EFVPTLDEGD MAVQAIRATG TSLSQSVEMQ RALEEKIMAF
PEVKTVVARI GTAEIANDPM PPNVADTLIM LKPRAEWPNP ERPKTDLLQA MEASITQLPG
NKYEFTQPIE LRFNELISGV RADIAVKVFG DDMATLLNTG ERIAAVLKTV PGAADVRVEP
ITGLPVVTVR MKREKMARYG FNVADVQAVI TVALGGKTAA GGDSTGMIYE GDRHFPLVVR
LPEDLRSNLK TLKRLPLPLP SRGSASQQFP LQGAAGVPLR PSYIPLSTVA TLEITPGPNQ
ISRENGKRRL AVTTNVRGRD LGSFVAEARS KIQAQVKIPP GYWSTWGGQF EQMIAAAKRL
EIVVPITLLL IFILLYRTFG TLKDGLLVFT GVPFALTGGI VFLWLRDIPL SISAGVGFIA
LSGVAVLNGL VMIAFIKKLR EEGLPLEEAV RQGALTRLRP VLMTALVAAL GFIPMALATS
TGAEVQRPLA TVVIGGILSS TLLTLLVLPA LYEWVHTNRS SR
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