Gene Noc_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1416 
Symbol 
ID3706063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1569796 
End bp1570860 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content46% 
IMG OID637737906 
Productmagnesium/cobalt transporter CorA 
Protein accessionYP_343435 
Protein GI77164910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.623057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGTT GCGGGAGGTG CTTAATTGGG CTCAACGGAT CAGCGATTGT AAGGCAGGGT 
GCGGGAGTAC CCCTTTTAAT CCGTCTTATT GACTATACAG CCACTGAATT CAGGGAACGG 
GAATTGGTCA ATGTCAGTGA GTGCCAACCC TATCTCCAGG CTCCCGGCAA TACTTGGATT 
CATGTTCAAG GCCATGCCGA AGTTGCCATT CTGCGCCAGC TTAGGGAACT GTTTAATCTT 
CATCCTTTGG CGATGGAGGA TGTCCTCAAT ACAGGGCAAC GTCCCAAGGT GGAAAGCTAC 
GATGAGCAGC TGTTTGTCAT TTTAAGTCTG GCTGTCATTA ATGACTCAAC CATAAAGACA 
AGGCAAATCA GCTTGTTTTT AGGCGAACAC TATATCGTAA GTTTCTGCAA CGGTTATAGC 
GATCCCTTTG AGCCGGTTAG AAAAAGGCTG CGAAAAAACG GTAAACGTTT CCAATCCCGC 
TCCATAGATT ATCTATTTTA CATTTTGATT GATTTGGTTG TTGATGAAGG GTTTCCGGTA 
TTAGAGCGCT TTGGTGAGCA GCTTGAAGAT CTTGAGATGG AGCTTTTGCG CTGCCCAACG 
CAGGATACCT TGGCCTGGAT TCACCAGATT AAACGGGAAC TCTTATTGCT GCGCCGGATA 
TTTTGGCCCC AGCGGGAAGT CATCCATGGA CTACTGCGAG AGGATTACAA TCTTATTGCC 
GAAGGGACCA AAATCTATTT GCGGGACTGC TATGATCACA GTACTCAGAT CATGGAGTTA 
CTAGAAACCT ATCGGGAGAT GAGCAGTAGC ATGTTGGATG TTTATCTTTC CAGTGTCAGT 
CATCATACCA ATGAAATTAT GCGGATATTG ACCATTATCG CCACTATTTT CATCCCTCTG 
ACCTTTATCG CGGGTGTTTA CGGCATGAAT TTCGGTAATG ATTCTAATAG CCCCTGGGCA 
ATGCCAGAGC TTCACTGGTA TTACGGTTAT CCCTTGATAT GGTTGGTGAT GATTGCAGTG 
GCCGTTTTAC TGCTCATCTT CTTCAAACAC CGGGGGTGGT TTTGA
 
Protein sequence
MAGCGRCLIG LNGSAIVRQG AGVPLLIRLI DYTATEFRER ELVNVSECQP YLQAPGNTWI 
HVQGHAEVAI LRQLRELFNL HPLAMEDVLN TGQRPKVESY DEQLFVILSL AVINDSTIKT 
RQISLFLGEH YIVSFCNGYS DPFEPVRKRL RKNGKRFQSR SIDYLFYILI DLVVDEGFPV 
LERFGEQLED LEMELLRCPT QDTLAWIHQI KRELLLLRRI FWPQREVIHG LLREDYNLIA 
EGTKIYLRDC YDHSTQIMEL LETYREMSSS MLDVYLSSVS HHTNEIMRIL TIIATIFIPL 
TFIAGVYGMN FGNDSNSPWA MPELHWYYGY PLIWLVMIAV AVLLLIFFKH RGWF