| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1406 |
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| Symbol | |
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| ID | 3706053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1558213 |
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| End bp | 1561461 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737896 |
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| Product | cation transport ATPase |
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| Protein accession | YP_343425 |
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| Protein GI | 77164900 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG0474] Cation transport ATPase
[COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCGG TTAGGGAGAA TAGTTGGCAT GCCCATACTG CAGAGGCCGT ATTGCAGCGG
ATGGGCGTTG AACGGCTGGG GTTGACCCAG CAGGAGGCGG AGCAACGTCT AAAGGAGTAT
GGGCCTAACC GACTCACACC GCCTAGGCGA AGAGGGGCCG TGGAACGGTT TTTAACCCAA
TTTCATAATG TGCTTATTTA TGTGTTGCTC GCCGCCGCAG TGGTGACTGC CTTACTGGCT
CACTGGGTGG ACACCGGGGT TATTTTGGCG GTCGTGGTGC TCAATGCCTT GGTTGGCTTT
ATTCAAGAAG GCAAGGCGGA ACGAGCCTTG GAAGCTATCC GTCATCTCCT CTCACCCCAA
GCGAACGTGC TGCGCGATGG CCAGCATAGA GTGATCCCCG CCGAATGCTT GGTTCCTGGT
GATGTGGTAA TCCTCCAGTC TGGTGATAAG GTGCCCGCGG ATCTTCGCCT TATTCGGGTC
AAGAATTTAC AAATTGAGGA AGCCCCCCTA ACGGGGGAAT CCATGCCTGC GGAGAAGGCG
CTTGAACCCG TTACTGAAAA TGCATCCGTA GGGGACCGAA CCTGCATGGC CTATTCCGGA
ACCTTGGTTA CCTACGGTAC AGGGGAAGGG GTGGTGATAG CCACGGGGGA TCGCACCGAG
ATTGGGCGCA TCAGCGCCAT GCTAGGGCAG GTGCAAACTC TGATAACGCC TTTGCTGCGG
CAGATAGCTG TGTTTGGTCG CTGGCTGACC GCCGCCATCT TGGGGCTGGC AGCGATTGTG
TTTGCCTTTG GGGTAGGGGT CCAAGGCTAT TCTCCCCAGG ACATGTTTCT CGCGGCCGTG
GGTCTTGCCG TGGCGGCCAT TCCAGAGGGA CTGCCTGCCA TTATGACCAT TACCTTGGCG
ATTGGAGTCC AACGCATGGC GCGCCGCAAT GCCATTATTC GTCACCTTCC GGCAGTGGAA
ACGCTGGGCT CCGTTAATGT GATTTGTTCT GATAAAACTG GCACCTTGAC CCGGAACGAG
ATGACGGTGC GCACGGTAGC CACCGCCGAT ACCTTATTCG AGGTCAGCGG AGTGGGATAT
CACCCCCATG GGGGATTTAG CCGGCAAGGC CAACTGATCT CAGTGGATGA CTATCCTGAG
TTGGGAAATC TCTGCCGTGC GGGTCTGCTG TGTAATGATG CAAATCTTCA CAAGTGGGAA
GAGCAGTGGA TTTGCCAAGG AGATCCCACT GAAGCCGCTT TGGTGAGCTT GGCCATGAAG
GCGAATTTGA TTCCGGAATT GGAACGGGAA GAATGGCGAC GAGTCGATGT TATTCCCTTT
GAGTCGGCAC TTCGTTTCAT GGCAACTTTG CACCAGGATC AGGCGGGGCA CGGCTTTATT
TATCTTAAAG GGGCGCCTGA ACAGGTTTTG GAAATGTGCT ATTGCCAGCG CAGCCAAGGT
GAGGATCGAC CCTTGGATAT AGCTTATTGG CATGGACGTA TTCTGGAGAT GGCAGGCAGG
GGTGAGCGGG TATTGGCTGT CGCTTTCCGA ATTAGCGATA TTAGCCGCTG CGATCTGCGT
TTTGTGGATG TGCGGGGAGA GTTAACCCTG CTAGGGTTAT TTGGAATTAT CGATCCCCCC
CGGGTGGAGG CGATTGCTGC GGTCAAGGCA TGCCAGGAAG CAGGAATCCA GGTCAAGATG
ATTACCGGAG ATCATCTTTT GACCGCCCAG ACCATTGGTC AGCAATTAGG TCTCAAACAG
GGCAGACAAG CATTGGCCGG TGCCGATCTG GAAATCATGG ATGATGAGAC CCTGCGTAAG
CTGGTTTTGG ATGTGGATAT CTTCGCGCGG GCTAGCCCAG AACATAAGCT CCGTTTGGTC
AAGGCTTTGC AGGCTCAAGG ACGAGTCGTG GCTATGACGG GTGATGGAGT CAACGATGCA
CCCGCCTTGA AACGGGCCGA TGTGGGTATT GCCATGGGAC AGAAGGGCAC GGAGGTGGCT
AAAGAGGCCG CCGAAGCCGT GCTTACCGAC GATGATTTTG CTTCCATTGC CCAAGCGGTA
AAGGAAGGAC GTACCGTTTA TGACAATCTA AAGAAATCCA TACTTTTTAT TTTGCCCACC
AATGGGGGCG AAGCGATGAC CTTGTTGGTT GCCATTTTGC TTGGCTATAT GCTCCCCATT
ACCCCGGTGC AGATTCTATG GATTAACATG ATCACGGCGG TTACCCTGGC CTTGGCGCTG
GCTTTTGAGC CTCCAGAAGG GAATGTCATG CGCCGTCCTC CCCGTGATCC GGGGGAACCG
GTACTATCCG GGTTTTTAAT TTGGCGTATT GTTTTCGTCT CGGCTATTTT GGTAGCCGGT
ACTTTTGGGC TCTTTCTTTG GTACCGGGAA CAAGGCGCAT CTATTGAATA TGCTCGGACT
ATTGCCGTGA ATACCATGGT AATGTTTGAG ATATTCTACC TTTTCAGTAC CCGCTATATA
ACTCGTTCAG CCTTATCCCG AGAGGGTCTA CTGGGTAACC GCTACGTTTT GATAGCTATT
ACCATCGTGA CGGTTTTCCA ATTGCTGTTT ACCTATAGCG CACCGATGCA GCAGCTTTTT
ACCACCGTGG CTTTAGGGCT CAGGGATTGG GGTTGGATTA TACTCGTTAC TTCTTCTGTA
TTTGTGTTAG TGGAACTGGA AAAACTATTT TTGAGGCAAA GGGAAGAAAA AGCCCCGCCC
CTAGTGACTA AACCAACTGT GGCGGCACTT GAGCGGTTTA AGCCCCGGGG AGTCTGGCTA
GCAGCGCTTG TTCTTCTGCT GCTTGGCGTC GGGGTAGGCC GTTGGGTATG GGTTCAGTTC
GATAGGGAGG GAGAAGAAGT CCTGGTCGTG ACAGAAGCAG AAAAACAGGC GCCTCAACCT
GCCGAGCCTC TGTTAGACAC TCAGACTCCG AAGGTAAAAA CGCCTCCTGG CAGGGAGCCG
GCGTCTGCCT CTCAGCAGCC TGAAGTGGCG GCGATACCGT TGCTGGAGGA AAGCAAGGAA
GAACCGGAAA GGCCCAAAAT GGCCTCTAAG CCTCCCACCC AGGAAGAATT GGAACAGGCC
AAAGTGCCCC CGGCGGCAAA AACAGCGATT GTCCAGCCAG GCGATAGCTT ATCCCTGATC
GCTGCACGAA CCTACGGCGA TCCCCAGCAA TGGCTGCTTA TCTATAAAGC CAATCGGGGC
AAGATCAAGG ACCCTAACAT CATCGTTCCA GGCATGGAGT TGATTCTCCC CCCAGTGCCT
AAAAATTAG
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| Protein sequence | MEPVRENSWH AHTAEAVLQR MGVERLGLTQ QEAEQRLKEY GPNRLTPPRR RGAVERFLTQ
FHNVLIYVLL AAAVVTALLA HWVDTGVILA VVVLNALVGF IQEGKAERAL EAIRHLLSPQ
ANVLRDGQHR VIPAECLVPG DVVILQSGDK VPADLRLIRV KNLQIEEAPL TGESMPAEKA
LEPVTENASV GDRTCMAYSG TLVTYGTGEG VVIATGDRTE IGRISAMLGQ VQTLITPLLR
QIAVFGRWLT AAILGLAAIV FAFGVGVQGY SPQDMFLAAV GLAVAAIPEG LPAIMTITLA
IGVQRMARRN AIIRHLPAVE TLGSVNVICS DKTGTLTRNE MTVRTVATAD TLFEVSGVGY
HPHGGFSRQG QLISVDDYPE LGNLCRAGLL CNDANLHKWE EQWICQGDPT EAALVSLAMK
ANLIPELERE EWRRVDVIPF ESALRFMATL HQDQAGHGFI YLKGAPEQVL EMCYCQRSQG
EDRPLDIAYW HGRILEMAGR GERVLAVAFR ISDISRCDLR FVDVRGELTL LGLFGIIDPP
RVEAIAAVKA CQEAGIQVKM ITGDHLLTAQ TIGQQLGLKQ GRQALAGADL EIMDDETLRK
LVLDVDIFAR ASPEHKLRLV KALQAQGRVV AMTGDGVNDA PALKRADVGI AMGQKGTEVA
KEAAEAVLTD DDFASIAQAV KEGRTVYDNL KKSILFILPT NGGEAMTLLV AILLGYMLPI
TPVQILWINM ITAVTLALAL AFEPPEGNVM RRPPRDPGEP VLSGFLIWRI VFVSAILVAG
TFGLFLWYRE QGASIEYART IAVNTMVMFE IFYLFSTRYI TRSALSREGL LGNRYVLIAI
TIVTVFQLLF TYSAPMQQLF TTVALGLRDW GWIILVTSSV FVLVELEKLF LRQREEKAPP
LVTKPTVAAL ERFKPRGVWL AALVLLLLGV GVGRWVWVQF DREGEEVLVV TEAEKQAPQP
AEPLLDTQTP KVKTPPGREP ASASQQPEVA AIPLLEESKE EPERPKMASK PPTQEELEQA
KVPPAAKTAI VQPGDSLSLI AARTYGDPQQ WLLIYKANRG KIKDPNIIVP GMELILPPVP
KN
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