| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1400 |
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| Symbol | |
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| ID | 3706086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1550310 |
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| End bp | 1553126 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637737892 |
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| Product | PAS sensor signal transduction histidine kinase |
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| Protein accession | YP_343421 |
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| Protein GI | 77164896 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGCAGA AGCCTTTAAA ATTGCGGGAT TCTGAAGACT ATCCATTTTC TGAGGCAGAT
ATTCTTGAGA ATATATCAGA AGCAATCATT ATTCTGGATG CTGATTGGGC TATTACCTAT
ATGAATAGCC ATGCCGAAAA AATATCTCGT AAGAAGCGTC AAAAAACCAT AGGTAAAAAT
TTCTTTCATA TCTTTCCTGA AATTAAAGAT CCTACATATA AAAAATTTTT TCGAAAGGTG
TTAAAAACGA GGCAAACCGA CACTATCGAA GGGTTTTATG AGCCTCAGGA TATGTGGCTG
ACTATAAAGA TTTTCCCTGT ACAATCTGGC GGGGTAGGCG TGGCGTTTCA GGAAAATACC
TTGCGCAAAA GAATTGAGGT TATCGCAGCC AGCCAAAGCG AGGCATTGAG TTTAGCCCTA
AAGGGAGCGT CTTTAGAAGA AGTTTTGAAT GTGTTAGTCC TCGCAGTTGA AAAACAGACG
GGACACAAGG CAACAGCCTC GATTTTGCTT TTAAGCGATG ATGGCAAGCA TCTCCTCCAT
GGGGCAGCGC CGAATTTATC CAATTCTTAT TGTGAAGCCA TTGATGGAAT GGAAATAGGC
GAAAATATTG GTTCTTGCGG TACGGCCGTT CATCGAGGTG AATTTGTCAT CGCAGAAGAT
ATTTCTATTG ATATAAAATG GAACAATTTC CGCGAGTTGG CATTAAAAAA CAATTTAGCA
TCTTGCTGGT CGATGCCTAT TTTTTCAACG CAAAATAAAT CGGTTTTGGG TACTTTTGCT
GTTTATTATC CAGAAGTGCG TAGCCCCGCA GAAACGGACA AGCATATTGT AGAAGTGCTC
TCCCAAACTG CTGCCATTCT TATAGAAAGA GAGAAGGAAA ATAAGGCACG AATGTTGGCA
GAAGAAGCCG TTAATTTAAG TACAAAAAAA TTTAGCAAAC AGCGCCGTCT ATATGAAACG
GTGTTATCTA ACACGCCGGA TCTAGTTTAT ATTTTTGATC TTGAAGGGCG CTTCACCTAT
GTAAACAAAG CCTTATTGAA AATGTGGGGG CGTACATGGG AGGAGTCTGT TGGAAAAACC
TGTTTTGAAC TTGGGTATGA GCCGTGGCAT GCAGAAATGC ATATGCGTGA AATCGAGCAA
GTTATTAAAA CTAAAAAACC TATACGCGGA GATGTACCTT TTACAGGCAT GCATGGAAGA
CGTATTTATG ATTATATTTT TATGCCTGTC TTGGGTGAAG ATGGAGAGGT AGAGGCGATT
GCCGGGACCA CCCGCGATGT GACCGAGCGT CGGAAAGCTG AAGAGGCCGC CCAAAAATCA
GAAGAACGAC AGCGCCTTGC TTTGGAAGCA TCCCATAGCT TTGGTATATG GGATTGGGAC
ATAAAAAATG ACGTTTTCAC CGCTGACGAA CGCTTCGGAG CTTTGTTCAA TCTTAGCCCG
GAAGAAGCAA AAGAGGGCGT GAAACTGGAA CAAGTTGCTC AATATATCCA TGAAAATGAC
TTTAAAAGAG TTCTAGATGT CATTAAAGAA AAATTACAAA CCGGAGGACA TTACAAAGAG
GAATACCGTG TAAGGCAAAA GGACGGGACT ATTAAATGGG TTTCTGTACG TGGGAATATT
CAACTGGACG AGAATGGTGA AGCTGTTCGT TTTCCCGGTG TTGGTGTTGA TATTACGCTT
GAGCGTAATG CTATTGAAGC TTTGCGTGAA GCGGATCAGA AAAAAGATGA ATTTCTGGCA
ACACTTACAC ACGAATTACG CAACCCCTTG GCGCCTATGC GTAATGCCCT TTACGTTATT
AAATCAAATA GTGCAAACGC TGAAGCTCAA ACTCATGCGC ATGAGTTAAT TGAAAGACAA
ATCAGCCAAA TAGTCCGATT GATTGATGAC CTGATGGACG TTTCACGCAT AACAAGGGGG
AAAATACGAA TATCCAAAGA TATAGTTGAT ATACAAAAAG CAATTACAGA CGCGGTGGAA
ACGGTGCAAC TTCTTATAGA AGAGCGGAAT CACGAGTTGA TACTGAATTT TCCAGATAAC
CCTGTTTTCG TAGAAGGCGA TTTAGTAAGG CTGGCGCAAA TATTCTCTAA TCTCATCAAT
AATGCGGCTA AATATACTGA ACAAAAAGGT GAAATTGAGG TTAATATAAG GCAATTTGGT
AGAGTGGTAG AAATAGAGAT AATTGATAAC GGCATCGGTA TAGCAAAAGA AAAACTGCCA
TTTATATTTG ATATGTTTTC ACAGTTTGAA GACCCATTAA ATCGTTCTCA AGGTGTCCTT
GGAATAGGCT TAACACTTGT AGAAAAGCTT GTTGAGCTAC ATGGCGGCTC TGTGGATGTT
GAAAGTAAAG GCATCAATGA AGGAACAAAG TTTACTGTTT CATTACCCGT GAGCGTAGCA
CAAAATGCAG ACACGCCAGA TAGTCTATGT AAAGTACCAA ACTTCACCCA GCAAAAAATT
AAAGTTCTGG TTGTTGATGA TAATAAGGAT GCCGCTCAAA CCATGGGTTG GCTTATGGAG
GCGTTGGGAT GTGAAGCCCA AACGGCTTTT GATGGTAAGA GCGCTATTAA ATTAGCCCTT
TCTTACCTCC CTGATCTTGT ATTGCTAGAT ATCGGATTGC CTGAAATGAA TGGCTATGAA
GTCTGCGAAA CTATGAAGAA AATACCGGAG CTTAAAAATA CTGTATTTGC CGCTCAAACC
GGGTGGGGGC AGCCAGAGCA CAAAAAACGC TCAAAAGAGG CCGGGTTCGA TCACCACCTG
GTTAAACCAG TGGAAATGGC TGCGTTAGAG GCTATTTTAA ATAAAATAAA CCTATAA
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| Protein sequence | MLQKPLKLRD SEDYPFSEAD ILENISEAII ILDADWAITY MNSHAEKISR KKRQKTIGKN
FFHIFPEIKD PTYKKFFRKV LKTRQTDTIE GFYEPQDMWL TIKIFPVQSG GVGVAFQENT
LRKRIEVIAA SQSEALSLAL KGASLEEVLN VLVLAVEKQT GHKATASILL LSDDGKHLLH
GAAPNLSNSY CEAIDGMEIG ENIGSCGTAV HRGEFVIAED ISIDIKWNNF RELALKNNLA
SCWSMPIFST QNKSVLGTFA VYYPEVRSPA ETDKHIVEVL SQTAAILIER EKENKARMLA
EEAVNLSTKK FSKQRRLYET VLSNTPDLVY IFDLEGRFTY VNKALLKMWG RTWEESVGKT
CFELGYEPWH AEMHMREIEQ VIKTKKPIRG DVPFTGMHGR RIYDYIFMPV LGEDGEVEAI
AGTTRDVTER RKAEEAAQKS EERQRLALEA SHSFGIWDWD IKNDVFTADE RFGALFNLSP
EEAKEGVKLE QVAQYIHEND FKRVLDVIKE KLQTGGHYKE EYRVRQKDGT IKWVSVRGNI
QLDENGEAVR FPGVGVDITL ERNAIEALRE ADQKKDEFLA TLTHELRNPL APMRNALYVI
KSNSANAEAQ THAHELIERQ ISQIVRLIDD LMDVSRITRG KIRISKDIVD IQKAITDAVE
TVQLLIEERN HELILNFPDN PVFVEGDLVR LAQIFSNLIN NAAKYTEQKG EIEVNIRQFG
RVVEIEIIDN GIGIAKEKLP FIFDMFSQFE DPLNRSQGVL GIGLTLVEKL VELHGGSVDV
ESKGINEGTK FTVSLPVSVA QNADTPDSLC KVPNFTQQKI KVLVVDDNKD AAQTMGWLME
ALGCEAQTAF DGKSAIKLAL SYLPDLVLLD IGLPEMNGYE VCETMKKIPE LKNTVFAAQT
GWGQPEHKKR SKEAGFDHHL VKPVEMAALE AILNKINL
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