Gene Noc_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1389 
Symbol 
ID3706075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1539345 
End bp1540127 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content50% 
IMG OID637737883 
Productglutamine amidotransferase, class-II 
Protein accessionYP_343412 
Protein GI77164887 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGCCAAT TACTTGGAAT GAATTGTAAC GTACCCACCG ATATCTGTTT CTCCTTTGAG 
GGCTTTAGTC AACGCGGCGG CGGTACCGAT GAGCACCGGG ACGGTTGGGG AATCGCTTTC
TTTGAGGGGA AAGGCTGCCG GAATTTTGTG GATATTTTAC CCGCTACTCA TTCTCCCGTT
GCCCATTTGG TCAAGGAATA TCCAATTAAA TCCCTCAATG TGATTGCCCA CATCCGTAAG
GCTACCGTAG GTAAAATACG TCTGGAAAAC ACCCATCCTT TCGTCCGGGA ACTCTGGGGA
CACTACTGGA TTTTTGCTCA TAATGGCGAT TTGAAAGATT TTATCCCGCC CCTTCTAACT
GACTTTCAGC CGGTTGGAGA AACTGATAGC GAGCAGGCTT TTTGCCTTCT GTTACAAGAG
CTGAAAGACC GCCACCCCGG CGGCATGCCT ACGCTACCAG CGTTACATCG AACCCTATGC
GCCACAGCAG CGAAAATCGC CGCTTACGGC AGTTTCAATT TTATACTTTC CAATGGGAAG
CATTTATTTG CCCACGGCTC TACCCAGCTA AGCTATATCG TTCGGCGTCA TCCCTTTGGC
CAGGCTCATT TAGTGGATAA GGATATAACA GTTGATTTTA GGGAAGTCAC CACCGAGCGG
GATCAGGTTG CCGTCATTGC CACCGCCCCT CTTACGGATA ACGAATCCTG GACCCTAATC
CCCCCAGGAA CCCTAGTCGT GTTCCAGAAT GGACTCCCAC TCATTTCAAA CTCCGGCAGA
TAA
 
Protein sequence
MCQLLGMNCN VPTDICFSFE GFSQRGGGTD EHRDGWGIAF FEGKGCRNFV DILPATHSPV 
AHLVKEYPIK SLNVIAHIRK ATVGKIRLEN THPFVRELWG HYWIFAHNGD LKDFIPPLLT
DFQPVGETDS EQAFCLLLQE LKDRHPGGMP TLPALHRTLC ATAAKIAAYG SFNFILSNGK
HLFAHGSTQL SYIVRRHPFG QAHLVDKDIT VDFREVTTER DQVAVIATAP LTDNESWTLI
PPGTLVVFQN GLPLISNSGR