Gene Noc_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1388 
Symbol 
ID3706074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1538793 
End bp1539167 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content46% 
IMG OID637737882 
Productheat shock protein Hsp20 
Protein accessionYP_343411 
Protein GI77164886 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTT ATTTTTCTAG CATGAAACAG GTATTCATTA ATTCTGAAGA ACAAGCCTAT 
CAAGAAAGCG TTTGGCAGCC TCCCGCCGAT ATCTATCGCA TTGAACGAGG ATGGCTAGTT
AAACTAGATC TTGCTGGGAT TCGCAACGAA GATATTCACC TTAGTATTCA CGAGCAACGT
TTGGTAGTCC AAGGCTTACG CCGAGACTGG ATAGTAGAAG CCGGGCAGCA ATATTACTCC
ATGGAAATTG CTTATAACCG CTTTAGGCGT GCGATTGAGT TTCCTGCTCC TTTGGAGCAG
GCTCGCATCA CCACCAAATA CCGTGATGGG ATGCTGCTCA TCTGGCTAGA AGTAACGTCT
CAAGAGGGTT TGTGA
 
Protein sequence
MATYFSSMKQ VFINSEEQAY QESVWQPPAD IYRIERGWLV KLDLAGIRNE DIHLSIHEQR 
LVVQGLRRDW IVEAGQQYYS MEIAYNRFRR AIEFPAPLEQ ARITTKYRDG MLLIWLEVTS
QEGL