Gene Noc_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1380 
Symbol 
ID3706105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1529305 
End bp1530372 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content45% 
IMG OID637737875 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_343404 
Protein GI77164879 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA TACTAATAAT ACTTGCTCTT GTGCTTATTA TTGCCACCCT TACGCCTCTG 
ATTCGACGCC ATGAATGGTG GATACGTGTC TTTGATTTTC CCCGGTTGCA AATCCTAATT
ATGGGCTTAT TAGTGTTTGC GGTTTTTTTC TTCTTGTGGG ATAAACAAAA TATATTTGAA
GGGATAACGC TTGTTGTTCT CGCGGCGGCG CTTCTCTTTC AGGGTTATAA AATACTTCCC
CATACTTTCT TTGCGGCTAA GCAGGTCCGC GGTACCTCTG CTGACACGCC GGGCAATACG
ATTTCTTTAC TGATCGCGAA TGTGTTGATG GGTAATCGGA ATGTTCAGCG CTTCTTGGCA
ATAGTGCGGG AGGCTGACGC TGACGTTGTA TTGATGTTAG AACCAGATCA ATGGTGGGAG
GAACAAGTTC GGGAGTTGGA GGTTAAATAT GCCTATACCG TAAAAAAACC TTTAGATAAC
CGCTATGGGA TGTTGTTGTA TTCCAAATTT GAACTGGTAG CTCCCGAGAT AAAGTTTTTG
CTTAAAGAAG GGATTCCTTC TATCCATACT GAGGTGAAAT TGCCTTCAGG ACAGTTAGTT
CGGATGCATT GTCTTCACCC GGAACCCCCG TCTCCCACGG AAGCCGACAC TTCTGTTAAT
CGGGACGCGG AGTTGCTGAT TGTGGGTAGA GAAGTAAAAA ATAGCGAACA GCCAGTGATT
GTAGCGGGTG ATCTTAACGA TGTCGCTTGG TCCTATACTA CCACGCTTTT TCAGAAAACA
AGCGGACTAC TTGATCCCCG CATCGGCCGC GGGATGTTTA ACTCCTATAA TGCCAAGCAT
CCCTTAATGC GCTGGCCTCT TGACCACCTT TTTCATTCAG AAGATTTTCT TCTGGTAAGG
ATAGCCCGGA TGCCGGCCTT TGGGTCCGAT CATTTTCCTA TCTATATTAA GCTTAGTCTT
AACTCCAACG CCGAAAATCT CCAGGAGTCG CCTGAAGAGC CGGATGCCGA AGATAAAGAA
TTTACAGCGG ATACGCTCCA AAAGGTAGAG CAGAAAGAAG AAATTTAA
 
Protein sequence
MKMILIILAL VLIIATLTPL IRRHEWWIRV FDFPRLQILI MGLLVFAVFF FLWDKQNIFE 
GITLVVLAAA LLFQGYKILP HTFFAAKQVR GTSADTPGNT ISLLIANVLM GNRNVQRFLA
IVREADADVV LMLEPDQWWE EQVRELEVKY AYTVKKPLDN RYGMLLYSKF ELVAPEIKFL
LKEGIPSIHT EVKLPSGQLV RMHCLHPEPP SPTEADTSVN RDAELLIVGR EVKNSEQPVI
VAGDLNDVAW SYTTTLFQKT SGLLDPRIGR GMFNSYNAKH PLMRWPLDHL FHSEDFLLVR
IARMPAFGSD HFPIYIKLSL NSNAENLQES PEEPDAEDKE FTADTLQKVE QKEEI