Gene Noc_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1348 
Symbol 
ID3706112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1496815 
End bp1497543 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content52% 
IMG OID637737844 
Product6-phosphogluconolactonase 
Protein accessionYP_343373 
Protein GI77164848 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.824012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA TTCAGGTTTT TCCTACTCCG GCGGCCCTTT ATCACAGTGC GGCGGAGTAT 
TGGGTGAGAA CGGCTAAAAG AGCCATTGAA AGGGCGGGAA CCTTCCATAT CGCCTTGGCC
GGGGGGAGCA CGCCGAGAGC CTTATATCAA TTATTAGCAA CGGAGCCTTA TGCCGGCCAA
ATAGACTGGC GCCGGATTCA TGTCTACTTT GGGGACGAAC GCTATGTGCC CAGAGATCAC
CCGGATAGTA ATTACCGTAT GGCCCGAGAG GCCTTGCTCG ATTCGGTAGC CATTCCTCCG
GAACAGATTT TAAGAATACA GACCGAGTTT CCGGAACCCG AGCTGGCGGC AGACGACTAT
GCGCAAGTGC TACAGTCTCA TTTGCCGGAG GGGGAAATTT TTGATCTGAT ATTATTGGGG
TTAGGCGCAG ACGGCCATAC CGCCTCTTTG TTTCCCGAGA CCCCCATATT GACAGTCCGT
GATCGTTTGG CAGCGGCAGT TTATGTAAAA AAATTAAAGG CTTGGCGTAT TAGTATAACC
TACCCCGCCG TTGAAAAAGC TCGCCAGATC CTGTTTCTTG TCACTGGCGC TGATAAGGCG
GCGGTCGTTA CCCACGTCTT ATCCCCCTCA GCGGACAAGA CTTTGCCGGT GCAGCATTTG
CAGGCTCAAG GTGAGGTTAG CTGGTATTTG GATGCGGAGG CAGCCCGCAA GTGGGAGGTA
ACAAAATGA
 
Protein sequence
MANIQVFPTP AALYHSAAEY WVRTAKRAIE RAGTFHIALA GGSTPRALYQ LLATEPYAGQ 
IDWRRIHVYF GDERYVPRDH PDSNYRMARE ALLDSVAIPP EQILRIQTEF PEPELAADDY
AQVLQSHLPE GEIFDLILLG LGADGHTASL FPETPILTVR DRLAAAVYVK KLKAWRISIT
YPAVEKARQI LFLVTGADKA AVVTHVLSPS ADKTLPVQHL QAQGEVSWYL DAEAARKWEV
TK