| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1344 |
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| Symbol | |
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| ID | 3706147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1492417 |
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| End bp | 1493937 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637737840 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_343369 |
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| Protein GI | 77164844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.088373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGAA CAAGAAACAT AGTCCGGTGG TGGCGAACGT TGGGTTTGTT GATTGGCATA
GTTTTGCTCA TAGGCTGTAG TTCTGGTTAT GAGGACAGGA ATTCTTTACG TTTTGGCCTG
GCGACCTCAC CCCTTACCCT TGATCCCCGC TATGCCACGG ATGCCGCCTC AGCCCGTATT
ACCCGCCTCT TGTATCAACC CCTCGTTGAT TTGGATGCCA GCGGCAAGCC CATCCCCAGT
TTAGCCCATT GGCAACAACT GTCTCCGAGC CGCTACCGGT TTCGATTACA GCTTGATCGT
CCTCGCTTTC ACGATGGCAG CAAGCTTAGC GCTCAGGATG TGAAAGCGAC CTATACCTCG
GTACTTGATC CAGATAATGG CTCGCCTTTT TTAGCTTCCT TGGATAAAGT GCAGTCTATT
GCGGTGCCCA ATCCAGAAAC CATTGACTTC GTTTTGAAAG AACCTGATTC CCTGTTTCCA
GGGCGGCTTA CCCTGGGGAT AATCCCTGCT TCCCTAATAG CTGTGGGTCA CCCTTTGAAT
CGCATTCCGG TAGGCAATGG TCCCTTTCGC TTTAAGGCGT GGCCGGAAGA GGGCCGATTG
ATACTCCAGC GGCGACGAGA TAGACAGGGG TTTGTATTTG TTCATGTACC CGATCCCACG
GTGCGGGTAT TAAAATTACT CCGTGGGGAG ATCCACATGC TGCAAAACGA TCTTCCCCAG
GAGCTGGTGG CTTACCTGGA AGATAAGGAG GAAATTTCCC TGCAACGGGG TCGGGGGAAT
ACGTTTACGT ATCTAGGATT TAATCTCGAT GATCCGGTAA CAGGCCAACC TCAAGTGCGT
TTAGCGATCG CCCATGCTTT GGATCGTCAA AAGATCATTC GCTATGTTTT TAAAGGAGCA
GCCCGGCCAG CTCAGGCCCT GCTGCCGCCC GAGCATTGGG CAGGCCACCC GGCTTTACCC
CCGCACGCCT ATGATCCCCA GCGGGCCAGG AAACTGCTTA AGGAAGCTGG CTTCAATGCC
CATTCTCCGG CCCGCGTTAG CTATAAGACC TCTAGCGATC CTTTCCGGGT TCGCCTGGCC
ACCATTATTC AGCATCAACT GCAACAAGTG GGCATTCAGG TAGAGGTGCA AAGTTATGAT
TGGGGAACCT TTTACGGCGA TATTAAGGCC GGGCGTTTCC AAATGTATAG CCTATCCTGG
GTAGGCGTTA AATTGCCGGA TGCCTTTCAT TACATCTTTC ATAGCGAGTC GGCTCCACCT
CAAGGGGCGA ACCGAGGCCA TTTTAACGAT CCTCAAAGTG ATTTTTTAAT TGAACGGGCG
GGAAATACAG ACAATCAAAA CCAGCAAGCC AATCTCTACC GCCGGTTACA AGCACGCCTT
CTGGAACAAC TGCCTTATGT GCCTCTTTGG TACGAAGATA ACGTGTTCGC AGCCCATCAA
GGTATCAGTC ATTATCAACT AGCACCCGAT GGGAATTATG ATGGCTTGGT GGAAGTGCGG
TTCCATCGGT ACGTGAAGTA A
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| Protein sequence | MRGTRNIVRW WRTLGLLIGI VLLIGCSSGY EDRNSLRFGL ATSPLTLDPR YATDAASARI
TRLLYQPLVD LDASGKPIPS LAHWQQLSPS RYRFRLQLDR PRFHDGSKLS AQDVKATYTS
VLDPDNGSPF LASLDKVQSI AVPNPETIDF VLKEPDSLFP GRLTLGIIPA SLIAVGHPLN
RIPVGNGPFR FKAWPEEGRL ILQRRRDRQG FVFVHVPDPT VRVLKLLRGE IHMLQNDLPQ
ELVAYLEDKE EISLQRGRGN TFTYLGFNLD DPVTGQPQVR LAIAHALDRQ KIIRYVFKGA
ARPAQALLPP EHWAGHPALP PHAYDPQRAR KLLKEAGFNA HSPARVSYKT SSDPFRVRLA
TIIQHQLQQV GIQVEVQSYD WGTFYGDIKA GRFQMYSLSW VGVKLPDAFH YIFHSESAPP
QGANRGHFND PQSDFLIERA GNTDNQNQQA NLYRRLQARL LEQLPYVPLW YEDNVFAAHQ
GISHYQLAPD GNYDGLVEVR FHRYVK
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