| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1342 |
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| Symbol | |
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| ID | 3706145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1490807 |
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| End bp | 1491976 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737838 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_343367 |
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| Protein GI | 77164842 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG0428] Predicted divalent heavy-metal cations transporter
[COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.779699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGGGG CGGCAACTCT CCTATCTTTG TTAAAAATGC AAGACTTTCT AATAGTTTTC
GGCCTTGCCT TGTTGCCCGC ATTGGGGAAT TTTGTCGGCG GGCTGTGGGC GGAATTTCTT
CGAACCTCAG AACGCGCCCT CAACCGGGCG CTCCACGCCG CGGCCGGTAT CGTCCTTGCT
ATCGTCGCCA TTGAACTGAT GCCCGAGGCG CTGAAAAGTA TCTCCCCCTG GATGATTGCC
TTGGCCTTTG CCCTGGGCGG CTTCGCCTAT ATGGCCCTGG AAGCGGCGAT TGAGTATTTG
CAGAAGAAAA AAGGAAAGAA TAGCTCTGGA AGCACGGCCA TGTGGATGCT CTATGGGGCG
GTGGCTACGG ATTTGTTCAG TGATGGCCTC ATGATTGGTG CCGGTTCGGC TGTTTCACCC
AGTATGGCGC TTATTTTGGC GCTGGGACAG GTGCTGGCCG ATGTTCCGGA AGGGTATGCC
GCGATCGCCA ATTTCAAGGA TAAAAACATC CCCCGTAGAC GGCGGTTTTG GCTTTCCGCT
TCTTTCGCTT TGCCAGCGCT AACCGCTGCC ACTCTGGCTT ATTTCCTGCT TCGTGACCAG
AATGAAACCC TAAAAATGGC GGGATTAGTT TTTACGGCGG GACTGCTTAC GGTAGCCGCT
GTGGAGGACA TGGTTTCCGA GGCTCATGAA ATCGCGCAAG ATACGCGCTG GTCGGACTTT
TCCTTCATTG GTGGCTTTGT CTTATTTATC CTTGTTTCCG CCGGTTTCAA AAGCTACCTG
ATAGAAGAGC CTGAATCTGC TGTAGCGGCC AAAGCAGGGG CGGAGGCGCT ACCGGCGCTT
TCGGTTTCCG AAACAGCCAA GTCTGGGGAA AAAGAGTCTC TCGTAACGCG CCTCCAGGAA
CGTTCCCGCG AAAAAGACGC CGACATGATT ACTAGGCTTC CTCCTACGTC GGCAACCAAA
AAATCACAGG AAAAGCGTGC GTTAACGTCT AGGCTGCCGA AAAGGTTGGT TGTCCAGCAC
GGTGATACCT TGTCGCAGAT CGCGGCGCGT CTCTATGGCG ATCCTGCTCA ATGGCGACTC
CTGTATGCGG CCAATCGGGA CAGACTTGAT AATCCTGATT TACTCAGAGC AGGAATGGAG
CTTGTTGTTC CCCTTGATTC GGAAAAATAG
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| Protein sequence | MMGAATLLSL LKMQDFLIVF GLALLPALGN FVGGLWAEFL RTSERALNRA LHAAAGIVLA
IVAIELMPEA LKSISPWMIA LAFALGGFAY MALEAAIEYL QKKKGKNSSG STAMWMLYGA
VATDLFSDGL MIGAGSAVSP SMALILALGQ VLADVPEGYA AIANFKDKNI PRRRRFWLSA
SFALPALTAA TLAYFLLRDQ NETLKMAGLV FTAGLLTVAA VEDMVSEAHE IAQDTRWSDF
SFIGGFVLFI LVSAGFKSYL IEEPESAVAA KAGAEALPAL SVSETAKSGE KESLVTRLQE
RSREKDADMI TRLPPTSATK KSQEKRALTS RLPKRLVVQH GDTLSQIAAR LYGDPAQWRL
LYAANRDRLD NPDLLRAGME LVVPLDSEK
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