Gene Noc_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1331 
Symbol 
ID3706134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1481294 
End bp1481605 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID637737830 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_343359 
Protein GI77164834 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.221514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTATT CATTAGATAT GAGGAATGCT ATTATATCGT TTGTTAAAAA CGGTGGTAGC 
AAAACCGAAG CCGCACGCTT ATTCAATGTT TCCCGCAATA CATTATATAG ATGGCTTGGT
CTTGATGATT TAGCGCCCAA AAAACATGGT CCTCGCAGCC GGAAGATCGA CAAGGGCAAG
CTGAAGGAGC ATGTTGAAGA TTACCCGGAC ATGTTTGTGC ATGAGCGTGC GGAGATATTT
GGTGTTCACG CCAGTTCGAT TAGCCGTGCG TTGAAGAGAT TGCGGATCGT AAAAAAAAGA
GCGCGGGTAT AA
 
Protein sequence
MTYSLDMRNA IISFVKNGGS KTEAARLFNV SRNTLYRWLG LDDLAPKKHG PRSRKIDKGK 
LKEHVEDYPD MFVHERAEIF GVHASSISRA LKRLRIVKKR ARV