| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1330 |
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| Symbol | |
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| ID | 3706133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1479429 |
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| End bp | 1481183 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637737829 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_343358 |
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| Protein GI | 77164833 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0898897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC AAAGTAAAGT CACCTGGATA GAGTGGCGCG GTTCACACCC GTCCCAGATG
GAAAGCGGGA AAGCACCAGA TAAAAACGAT CAGTATGGGA AAAATCGGGT AATGTTGCTA
GTGAACAGCA GCGGCAACAG AGCCCTCCTG GCTAATCATT TACGTCCCTA TTGTCAGCTT
GTAGAACCCA ACGATCCTTC GCTAAAGCCA GAATCATTTG ACCTCGCTAT TGTAGATATG
GAAGGTTTGC GGCAATGGCA AAAGCAATTG CTAGACGCCA AGCAACGCGA AGAACCCGTA
TTCCTTCCGG TCGTATTAAT CCTTTCCCGC AGCGAATTAA AACGCCGTTT TAAGACTTTT
TGGGATCTTA TTGATGAGTT TATTCTCTCT CCCATAGAAC GGCGAGAGTT TACAGAGCGC
GTATCCATGC TCCTTAGAAC CCGTCAGCTA GCACTGACTC AGCGCTCACA CCTTGCATAT
CTGGTCAATC ATGATCGCCT GACCGGTCTA CCCAATCAAA CTCTGTTCAT GGAACACCTG
ATAGATTCGG TGCGCGATGC CTCAATTTTA AACAAGCAAG TCTATGTCAC TGTGGTCCAT
ATTCCGCTGG CGCGCACCAT GAGATCCCTA GGTCATTACG GCTTGGAGCG CGTTGTGGCT
AACTGCTCAA CACGTCTTAA CGCGGTACTG CGGGATGAAG TATTGCTGGC CCGGCTTACT
ACAGAAGAGT GGGGACTAAT TCACAGACCC GGTGAGACGT TAAGCCGGGT TCTCGAGATT
TGCAGGCGCA TTCAGCTTCT AGCAGACGAG CCTATTCCTG TAAGGGGGGA GCATATCCGT
TTAGCCCCAC GCATTGGCGT TGGAATCTAT CCCGATGACA GCTCTGATGC GAATGGAACG
CTCGAATGCG CCATGGCGGC CCTCTCGGAG GATAAAGGAC CTGCCCCGGT TTTTTATTCG
CGTCGGATTC AACACGAGGC GCTACGATTT ATTCGCACTG AATCAAAGCT ATACGAAGCC
CTGGAAAAAG AGGAATTTGA ACTATGGTTC CAACCCCAGG TAAGTTTTGA AACCGAAAAG
CCCGTTGGGG TAGAAGCACT GGTGCGGTGG CGCCTTCCCA ACGGAGAATT GGCGCCACCG
GGTGAATTCT TACCGGTCGC CGCCTCAACC GGACAAATTC TAAGAATTGA CCGATGGGTG
CTGGAAAAAG CCTGCGCCAC AATGAATGCA TGGCGTGACG ACAATATAGG CTTACAACGC
GTTTCAGTGA ATGTAACGGT GGAAGATATT GATGCTCCGG ATTTCGTGGA ATTTATCAAA
AGGGCGCTCG ATCAATATCA ACTACCGCCT CCCTCTTTGG AGTTAGAATT GACCGAAACA
ACGTTTTTTA AAAGTAGTCC TGCAAATCTT GAAAAACTCA ATTTACTTCG CTCTGAAGGT
ATTAGTGTCG CCGTGGATGA TTTTGGCAAG GGTTACTCAT CCTTGAATTA TCTTCATAAA
CTGCCCATTA CCACGTTAAA GATAGATAAA GAATTTATTG AAAACGCCAT TAATAATCCA
ACCAGTGCTG CAATTGTGGA AACCATTGTA TGGCTAGCCA AAAAATTTAA ATTGGAGACC
GTCGCTGAGG GTATCGAAAC TAAAGCACAG GTAGAATTTC TTCGCTCGCT TGGGGTAACC
ACCGCCCAGG GTTTTTTTTA CAGTCAACCT ATTCCAGAGG CAGAATTACG AGAATGGATA
AAATATTACC GCTAA
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| Protein sequence | MKEQSKVTWI EWRGSHPSQM ESGKAPDKND QYGKNRVMLL VNSSGNRALL ANHLRPYCQL
VEPNDPSLKP ESFDLAIVDM EGLRQWQKQL LDAKQREEPV FLPVVLILSR SELKRRFKTF
WDLIDEFILS PIERREFTER VSMLLRTRQL ALTQRSHLAY LVNHDRLTGL PNQTLFMEHL
IDSVRDASIL NKQVYVTVVH IPLARTMRSL GHYGLERVVA NCSTRLNAVL RDEVLLARLT
TEEWGLIHRP GETLSRVLEI CRRIQLLADE PIPVRGEHIR LAPRIGVGIY PDDSSDANGT
LECAMAALSE DKGPAPVFYS RRIQHEALRF IRTESKLYEA LEKEEFELWF QPQVSFETEK
PVGVEALVRW RLPNGELAPP GEFLPVAAST GQILRIDRWV LEKACATMNA WRDDNIGLQR
VSVNVTVEDI DAPDFVEFIK RALDQYQLPP PSLELELTET TFFKSSPANL EKLNLLRSEG
ISVAVDDFGK GYSSLNYLHK LPITTLKIDK EFIENAINNP TSAAIVETIV WLAKKFKLET
VAEGIETKAQ VEFLRSLGVT TAQGFFYSQP IPEAELREWI KYYR
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