Gene Noc_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1328 
Symbol 
ID3706131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1477545 
End bp1478993 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content50% 
IMG OID637737827 
ProductKaiC 
Protein accessionYP_343356 
Protein GI77164831 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAA CCTCTGAACG CGTATCCACT GGGCTTGAGG CGTTGGACCA TATCCTCTCC 
GGAGGTCTTA TTAAACAGTC GGCTTACTTG GTGCGCGGGG GGCCAGGCCA AGGAAAAACA
ACCCTGGGTC TGCACTTTCT TGCTGCTGCG GATGGCCAGA GCTCCCCGCT CTTTATTGGC
TTTCAAGAAC CAGAAGAACA ACTCCGAGTC AATGCCGAAT CGGTAGGTAT TGACATATCC
AATTTTCGTT TCCTGAGTTT GACCCCTGAG GAGCATTTTT TTACCGAACA ACAAAGCTAT
GATGTTTTCG CTGCCGCTGA CGTAGAGCAA GAACCCCTTG CAAAATCCGT CATGGAAACG
GTAGAACGAG CTATTCCTAC CCATGTTTTT GTTGATTCCA TGACCCAGCT ACGTTTTCTT
TCGGCAGATG TTTATCAGTA CCGTAAACAA GTCTTATCCT TTTTACGCTA TTTCCGAGAG
CGAGGCGCCA CCATCTTATT TACCTCGGAG CTTAGTGCGG AGCTCCCCGA TGAGGATCTT
CAATTTATTG CTGATGGGGT CATCACCTTG GATACCGCGC CTAATGGTTC TTTTTTACAA
GTATCTAAGT TTCGCGGCTC CAACTTTTTA CGGGGCCCGC ATCAGATGCG GGTGGGCAAT
CGGGGTTTGG AAATCTTCCC CCGTCCCTTA CCCCCCAAAG CAAATCTTGG CGAGGACGAG
CGTTGGCGTT GGAGTACCGG GATTGAAAAG TTGGATAAGA TTCTGGGTGG CGGCCTCGAA
GCTGGAACAA TTTCGCTCAT TACTGGCCCC TCCGGCACTG GTAAATCTAC CCTCGCCTCA
CTTTTCGTGG CCCAGGCCGC GGCCCAAGGA CGGAAAGCGG CAATCTATCT CTTTGAGGAG
GAAATAGATG CCCTCCTTCA TCGCGCTTCT TCCTTAAGTA TTGATCTAAA GAACCCCCTG
AGAGAGGGAC AAATAAAATT GGAGCAGGTT GAGCCTTTGC GCTATCTCAC GGATGAATTC
GCAACGTTAG TTAGCCAAGA GGTGGAAGAA GAAGGCGTGG AGCTCATCGT ATTGGACAGT
ATCGCCGGAT TTGAGCTCAC CCTCGGTGGA GACGAGGAAG CTAAAAGGGC ACTTCATGCC
TTGGCTAAAA GTTTATCGCG GCGGGGGGCA TCGGTATTGC TAGTTAATGA GATCGAAGCA
CTGACGGGAC AGTTTAAAAT TTCCGGGAAA GGCATCAGCT ACCTCTCAGA TAACGTGATA
TTTTTGCGTT TTATGGAAAT TGAAGGCGCA CTTAAAAAAT CATTAGGCGT GTTGAAAAAA
AGACTAAGCG CGTTTGATAC GCGGATGTAT AGTTATGAGA TTGGCCCCAC CGCTTTGTTG
ATTGGCGATC CCGTGGGCAA ACAAGGCTGG CAGGGTGTGC TTGACGGTCA ACAGGCTGTC
CACCCATAA
 
Protein sequence
MSGTSERVST GLEALDHILS GGLIKQSAYL VRGGPGQGKT TLGLHFLAAA DGQSSPLFIG 
FQEPEEQLRV NAESVGIDIS NFRFLSLTPE EHFFTEQQSY DVFAAADVEQ EPLAKSVMET
VERAIPTHVF VDSMTQLRFL SADVYQYRKQ VLSFLRYFRE RGATILFTSE LSAELPDEDL
QFIADGVITL DTAPNGSFLQ VSKFRGSNFL RGPHQMRVGN RGLEIFPRPL PPKANLGEDE
RWRWSTGIEK LDKILGGGLE AGTISLITGP SGTGKSTLAS LFVAQAAAQG RKAAIYLFEE
EIDALLHRAS SLSIDLKNPL REGQIKLEQV EPLRYLTDEF ATLVSQEVEE EGVELIVLDS
IAGFELTLGG DEEAKRALHA LAKSLSRRGA SVLLVNEIEA LTGQFKISGK GISYLSDNVI
FLRFMEIEGA LKKSLGVLKK RLSAFDTRMY SYEIGPTALL IGDPVGKQGW QGVLDGQQAV
HP