| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1327 |
|---|
| Symbol | |
|---|
| ID | 3706264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1475891 |
|---|
| End bp | 1476625 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637737826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343355 |
|---|
| Protein GI | 77164830 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT CACTCGCCGA GATTTACAAA AAATACTTTG AAATTTATCC GCAAGTCGAT
GAAGCGCCAG AGCAACTCGC CGAAGTCTAT CGGCTCCGTT TTCAAGTATA TTGCGTGGAA
AATCCATTTG AAGACTCATC TCATCACCCT GATGGGTTAG AAAAGGACCC ATTTGATGAC
TGTTCCATCC ACAGTTTGTT AGTACACCGG CAGACAAGCC TTACTGCGGG CACGGTGAGA
TTGGTTCTCC CCTCCGAGGA TAATCCAGCG TTAGCGCTCC CTATCAACCA GCTGTGCCGG
GAACCTCTGC TGAACGACCT TAATTTACTG CCGCGTTCTA CGTTAGCGGA GGTATCCCGG
TTTGCCGTGT CTAAAAATTT TAGACGGCGC CTTGGTGAAG CCAGCTCTCC AAGTGGAGTT
AGCACCGAGT GGCATGAAGC GCAAGCAAGG GAACAGGGAA GAAAGATACC CCATCTATGC
TTGGGGCTGA TCCAAGCCTT AGTGGGTAAT AGTTACAAAT ATGGCGTTAC CCATTGGAGC
GCGGTAATGG AGCCAGCGCT GTTGCGTATG CTGAAGCGAG TAGGTATCCA TTTTATAAAT
TCAGGGCCTC TTATTGAGTA CCATGGCTGG CGCCAACCCT GCTACGCGGA ACTCGCCCCG
ATGTTATCCC AGGTTAAACT GGAACGTCCC GATGTGTGGG AATTGATAAC GGATGATGGG
CGCTATGGCC AATAG
|
|---|
| Protein sequence | MTESLAEIYK KYFEIYPQVD EAPEQLAEVY RLRFQVYCVE NPFEDSSHHP DGLEKDPFDD
CSIHSLLVHR QTSLTAGTVR LVLPSEDNPA LALPINQLCR EPLLNDLNLL PRSTLAEVSR
FAVSKNFRRR LGEASSPSGV STEWHEAQAR EQGRKIPHLC LGLIQALVGN SYKYGVTHWS
AVMEPALLRM LKRVGIHFIN SGPLIEYHGW RQPCYAELAP MLSQVKLERP DVWELITDDG
RYGQ
|
|---|
| |