Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1317 |
Symbol | |
ID | 3706254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1465505 |
End bp | 1467175 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737816 |
Product | phosphoenolpyruvate phosphomutase |
Protein accession | YP_343345 |
Protein GI | 77164820 |
COG category | [G] Carbohydrate transport and metabolism [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02320] phosphoenolpyruvate phosphomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG TACCCTTACC CACGGCTGGA ACTTTTAAAC GTCGGCCTTC AAAGTTTGCC CAATTACGGG CTTTACTGAA ATCCGAACCC ACAGAATTTC TGCTAGAAGC CCACAATGGC CTTAGCGCCC GGATTGCCGA AGAAGCCGGA TTTAAGGGAG TTTGGGCCAG TGGTCTGGCA ATTTCTTCCC AGTTTGGAGT CAGAGACAAT AACGAGGCTA GCTGGACCCA AATAGTGGAT ATGCTAGAGT TTATGTCCGA CACCACCACT ATTCCCATTC TCCTGGATGG CGATACGGGA TATGGAAATT TTAATAACTT GCGCCGGCTA GTGAGAAAGC TAGAGCAGCG GGAAATTGCC GGCGTTTGTA TCGAAGATAA AGTTTTCCCT AAAACTAACA GTTTTATTGG CGGTGAACGC CAGCCTTTAG CTGAAGTGGA CGAATTTTGC GGCAAGATCA AGGCTGGGAA AGATTCTCAA AGTGATCCCG ATTTCTCCAT CGTGGCACGA GTCGAGGCTT TAATCGCGGG CTGGGGGCTG GATGAAGCCT TACGCCGCGC AGAAGCTTAC CATCGGGCTG GGGCGGATGC CATATTAATC CACAGTAAAC TTTCCCAAGC CGATGAGATC CTAGCCTTCG CCAGAGAATG GGGAAACCGG GCACCACTCA TTATTGTCCC CACTAAATAC TACAGTACGC CCACCGAAGT ATTCCGCAAG GCGGGCATCA GCACCGTCAT TTGGGCTAAT CATTTAATTC GGGCCGCTGC GGCCGCAATG GCTCAAGTGG CGCGGGAAAT CCATGATACG CAAACCCTAG TTAACATCGA GGATCAGGTT GCACCGGTCA GTGAAATTTT CCGCCTCCAA GGGGCCGAGG AATTACTGGC TGCTGAACGC CGTTACGGCG CTTCCCCAGA GGCCGAGACG GGAGCGATTG TGCTGGGGGC TACCCGGGGC AAAGGACTAG AAAGCCTGAC TCAGGATCGT CCCAAAGTCA TGCTGCCGGT GGCCGGCATC CCACTGCTAC GCCGCCTAGT AGACGAATTT AAACGACAGC ACGTTAATCG CATCACGGTA GTGACTGGTT ATAAACCAGA AGCCATTGAT GTCAAGGCTA TTTCCCTCAT TCATAACCCA GATTACGGCC ATAGCAGTGA GTTATCTTCC CTTGCCTGTG CCCTTGAGAG CTTATCCGAG GATACCATCA TCACCTATGG CGACCTGCTG TTCCGCAGCT ATATCCTAAA TGATTTGCGC CACGTGCCAG GAAACATTGT TGTCGTTGTG GATTCTGCCC TTTCTCCTGG CATGAAGGAT GATATCCGGG ATGTGGCTTT CTGCTCCCAG CCGGATGACC GTTCCTTGTT CCGCCAGGAT GTAGACCTCC TTCGTATTGA AACGCAAAAA AAGCAGCTCA GTAAACAGCC CCACGGTCGC TGGATCGGCA TGGCCCGAGT CGCGGGTGAA GGACGCCAAT GGCTGCTCGA TGCCCTCCAA GCATTACGGC AACAAGAGAA TTTTTCCCAA CTTGCAATGC CCGATTTATT CAATCATCTG GTCGCCAACG GCCACCCAAT TAAGGTTCTC TACATTAACG GCCATTGGCT GGATGTAAAT GACATGGAGG ATCTAACCCG CGCCGGCGAC TTTGCCCACG GTCATCAATA A
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Protein sequence | MSTVPLPTAG TFKRRPSKFA QLRALLKSEP TEFLLEAHNG LSARIAEEAG FKGVWASGLA ISSQFGVRDN NEASWTQIVD MLEFMSDTTT IPILLDGDTG YGNFNNLRRL VRKLEQREIA GVCIEDKVFP KTNSFIGGER QPLAEVDEFC GKIKAGKDSQ SDPDFSIVAR VEALIAGWGL DEALRRAEAY HRAGADAILI HSKLSQADEI LAFAREWGNR APLIIVPTKY YSTPTEVFRK AGISTVIWAN HLIRAAAAAM AQVAREIHDT QTLVNIEDQV APVSEIFRLQ GAEELLAAER RYGASPEAET GAIVLGATRG KGLESLTQDR PKVMLPVAGI PLLRRLVDEF KRQHVNRITV VTGYKPEAID VKAISLIHNP DYGHSSELSS LACALESLSE DTIITYGDLL FRSYILNDLR HVPGNIVVVV DSALSPGMKD DIRDVAFCSQ PDDRSLFRQD VDLLRIETQK KQLSKQPHGR WIGMARVAGE GRQWLLDALQ ALRQQENFSQ LAMPDLFNHL VANGHPIKVL YINGHWLDVN DMEDLTRAGD FAHGHQ
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