Gene Noc_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1317 
Symbol 
ID3706254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1465505 
End bp1467175 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content52% 
IMG OID637737816 
Productphosphoenolpyruvate phosphomutase 
Protein accessionYP_343345 
Protein GI77164820 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02320] phosphoenolpyruvate phosphomutase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTG TACCCTTACC CACGGCTGGA ACTTTTAAAC GTCGGCCTTC AAAGTTTGCC 
CAATTACGGG CTTTACTGAA ATCCGAACCC ACAGAATTTC TGCTAGAAGC CCACAATGGC
CTTAGCGCCC GGATTGCCGA AGAAGCCGGA TTTAAGGGAG TTTGGGCCAG TGGTCTGGCA
ATTTCTTCCC AGTTTGGAGT CAGAGACAAT AACGAGGCTA GCTGGACCCA AATAGTGGAT
ATGCTAGAGT TTATGTCCGA CACCACCACT ATTCCCATTC TCCTGGATGG CGATACGGGA
TATGGAAATT TTAATAACTT GCGCCGGCTA GTGAGAAAGC TAGAGCAGCG GGAAATTGCC
GGCGTTTGTA TCGAAGATAA AGTTTTCCCT AAAACTAACA GTTTTATTGG CGGTGAACGC
CAGCCTTTAG CTGAAGTGGA CGAATTTTGC GGCAAGATCA AGGCTGGGAA AGATTCTCAA
AGTGATCCCG ATTTCTCCAT CGTGGCACGA GTCGAGGCTT TAATCGCGGG CTGGGGGCTG
GATGAAGCCT TACGCCGCGC AGAAGCTTAC CATCGGGCTG GGGCGGATGC CATATTAATC
CACAGTAAAC TTTCCCAAGC CGATGAGATC CTAGCCTTCG CCAGAGAATG GGGAAACCGG
GCACCACTCA TTATTGTCCC CACTAAATAC TACAGTACGC CCACCGAAGT ATTCCGCAAG
GCGGGCATCA GCACCGTCAT TTGGGCTAAT CATTTAATTC GGGCCGCTGC GGCCGCAATG
GCTCAAGTGG CGCGGGAAAT CCATGATACG CAAACCCTAG TTAACATCGA GGATCAGGTT
GCACCGGTCA GTGAAATTTT CCGCCTCCAA GGGGCCGAGG AATTACTGGC TGCTGAACGC
CGTTACGGCG CTTCCCCAGA GGCCGAGACG GGAGCGATTG TGCTGGGGGC TACCCGGGGC
AAAGGACTAG AAAGCCTGAC TCAGGATCGT CCCAAAGTCA TGCTGCCGGT GGCCGGCATC
CCACTGCTAC GCCGCCTAGT AGACGAATTT AAACGACAGC ACGTTAATCG CATCACGGTA
GTGACTGGTT ATAAACCAGA AGCCATTGAT GTCAAGGCTA TTTCCCTCAT TCATAACCCA
GATTACGGCC ATAGCAGTGA GTTATCTTCC CTTGCCTGTG CCCTTGAGAG CTTATCCGAG
GATACCATCA TCACCTATGG CGACCTGCTG TTCCGCAGCT ATATCCTAAA TGATTTGCGC
CACGTGCCAG GAAACATTGT TGTCGTTGTG GATTCTGCCC TTTCTCCTGG CATGAAGGAT
GATATCCGGG ATGTGGCTTT CTGCTCCCAG CCGGATGACC GTTCCTTGTT CCGCCAGGAT
GTAGACCTCC TTCGTATTGA AACGCAAAAA AAGCAGCTCA GTAAACAGCC CCACGGTCGC
TGGATCGGCA TGGCCCGAGT CGCGGGTGAA GGACGCCAAT GGCTGCTCGA TGCCCTCCAA
GCATTACGGC AACAAGAGAA TTTTTCCCAA CTTGCAATGC CCGATTTATT CAATCATCTG
GTCGCCAACG GCCACCCAAT TAAGGTTCTC TACATTAACG GCCATTGGCT GGATGTAAAT
GACATGGAGG ATCTAACCCG CGCCGGCGAC TTTGCCCACG GTCATCAATA A
 
Protein sequence
MSTVPLPTAG TFKRRPSKFA QLRALLKSEP TEFLLEAHNG LSARIAEEAG FKGVWASGLA 
ISSQFGVRDN NEASWTQIVD MLEFMSDTTT IPILLDGDTG YGNFNNLRRL VRKLEQREIA
GVCIEDKVFP KTNSFIGGER QPLAEVDEFC GKIKAGKDSQ SDPDFSIVAR VEALIAGWGL
DEALRRAEAY HRAGADAILI HSKLSQADEI LAFAREWGNR APLIIVPTKY YSTPTEVFRK
AGISTVIWAN HLIRAAAAAM AQVAREIHDT QTLVNIEDQV APVSEIFRLQ GAEELLAAER
RYGASPEAET GAIVLGATRG KGLESLTQDR PKVMLPVAGI PLLRRLVDEF KRQHVNRITV
VTGYKPEAID VKAISLIHNP DYGHSSELSS LACALESLSE DTIITYGDLL FRSYILNDLR
HVPGNIVVVV DSALSPGMKD DIRDVAFCSQ PDDRSLFRQD VDLLRIETQK KQLSKQPHGR
WIGMARVAGE GRQWLLDALQ ALRQQENFSQ LAMPDLFNHL VANGHPIKVL YINGHWLDVN
DMEDLTRAGD FAHGHQ