| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1316 |
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| Symbol | |
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| ID | 3706253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1464340 |
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| End bp | 1465494 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737815 |
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| Product | thiamine pyrophosphate enzyme |
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| Protein accession | YP_343344 |
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| Protein GI | 77164819 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAG CCCATGAGTT TATCGACAGT GCTCGCGAAG GCGGGTTTGG CTGTTACGGA
GGCGTTCCCT GCTCCTTCCT CACTCCTTTT ATTAACTATG TTATCGAGCG CAACGATTTA
ACGTATGTTT CCTCGGCTAA TGAAGGTGAT GCCGTTGCTC TGGCTGCGGG CGCCTATTTA
GGTGGGCAAC CAGCTATTGC TATGATGCAG AATTCTGGTC TCGGTAACGC CGTTAATCCA
CTGACCTCCC TGACCCATAC CTTTCACATC CCGATACTTC TCATCATTAC CCTGAGAGGA
GACCCAACGC TTCGAGATGA ACCCCAGCAT GAACTCATGG GCCAAATTAC CGGCTCACTG
CTGGAAGCCA TGGAAATTCC CTGGGAGTAT TTTCCCTTGG AAAGCAAGCA AATCCACTCA
GCCTTGGAAC GGGCCCACCA ATACATGCAA CAGGCTGAAC GTCCTTACGC CTTTATTATG
CGCAAGAATT CCGTGGCCCC CTATGGGGCA AGTGGCAGTA AAATTCTCAA GCGCGCTACC
CATCAAAATA ACGAATTACA TCGCTATTAC CAGGCCGGTT CTCTCTGCTC CCGCTCCGAG
GCTTTAGCTG ATCTGCTTTC CCGAACGCCG GAAAAAAATA CCGTGGTCAT TGCCACCACA
GGCTACACTG GCCGGGAATT ATGCGCCCTT GAGGATCGCC CTAATCAGAT TTATATGGTG
GGCTCCATGG GCTGTGCCTC CTCATTGGGC CTAGGGCTCT CCCTGGCCCG TCCAGATTTA
CGGGTGGTGG TCATTGATGG TGATGGCGCC GCCTTGATGC GTATGGGCAA TTTGGCAACG
GTGGGTACCT ACGGCGGCCC TAATTTAATC CATGTTCTTC TGGACAATGA AGTTCATGAT
TCCACAGGAG CCCAGGCGAC GGTTTCCAAC AATTTCTCCT TTGCCCAGGT GGCGAAGGCC
TGCGGTTACT CCTTGTCCCT GGAAGGAAAC ACCCCATCCT TACTGGATGA GTTGTTTACG
GCTCCAGATT CTAACGGTCC CCGTTTTGCC CAGCTTAAAA TACGCCCGGG CGCTCCCGCG
GATCTGCCCC GTCCCCCCTT AACTCCACCG GAGATTAAAG CCCGGTTAAT GGCCCACTTA
AAGAGGATTC CATGA
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| Protein sequence | MIEAHEFIDS AREGGFGCYG GVPCSFLTPF INYVIERNDL TYVSSANEGD AVALAAGAYL
GGQPAIAMMQ NSGLGNAVNP LTSLTHTFHI PILLIITLRG DPTLRDEPQH ELMGQITGSL
LEAMEIPWEY FPLESKQIHS ALERAHQYMQ QAERPYAFIM RKNSVAPYGA SGSKILKRAT
HQNNELHRYY QAGSLCSRSE ALADLLSRTP EKNTVVIATT GYTGRELCAL EDRPNQIYMV
GSMGCASSLG LGLSLARPDL RVVVIDGDGA ALMRMGNLAT VGTYGGPNLI HVLLDNEVHD
STGAQATVSN NFSFAQVAKA CGYSLSLEGN TPSLLDELFT APDSNGPRFA QLKIRPGAPA
DLPRPPLTPP EIKARLMAHL KRIP
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