| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1308 |
|---|
| Symbol | |
|---|
| ID | 3706245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1454059 |
|---|
| End bp | 1454940 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637737808 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_343337 |
|---|
| Protein GI | 77164812 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.038834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTG AAGGACTCCG TGGAAACGCG AATTGTAGCA AGGCGAGGGA GCTTGTCGGG
AACAAGCGAA CGAGACTTAG CCGCAAACTC CAACTTTTAA GCCTATCAGC CCTACTTCTG
CTGATCGCTT GCGCTACCTC CCCCACAGGT CGGTCTCAGT TGGAGTTTTT CCCTTCTAGC
CAAATAGCGC AAATGGGAAA GGCAGCTTAT CAACAAATCA AACAAGAAAC ACCTGTTTCA
AAAGATCCGC AAATCAACCG CTATATACGC TGTGTAGCCA ATGCTATCAC GCCGCTAGTC
CCTCCTCTTG AGAACGGGGA GCAGTGGGAA GTAACTGTAT TTAAAGCCGA CCAAGCCAAT
GCCTTTGCCT TGCCGGGAGG CCATATCGGC ATTTACACCG GTCTTCTTTC AGTAGCTGAG
AACGCTGATC AGCTTGCGGC GGTCATTGGC CATGAAATTG GCCATGTCAT CGCCGAACAC
GCCAATGCTC GCATGTCTAC CCAATACGCT ACCCAAGCTG GCCTTCAACT CATTCAAGCA
TTGGCGGGCG TTCCTGGCAG CGCCACCGGA CAGCAGCTCA TGGCCCTAAT GGGGGTAGGC
GCCCAAGTGG GGATTATCCT ACCTTTCAGC CGTGCTCAAG AAAGCGAATC AGATATCCTT
GGCTTACGCT ACATGGCTCA GGCTGGTTTT GATCCGCGTC AAAGCATTCA ACTGTGGCAG
AACATGATGG CAGCTAATGA TGGACGCAAA CCACCTGAAT TTCTATCCAC CCATCCTTCT
GAGAAAACCC GCATTAGCGA ACTAGAACAA CGCTTACCCC AAGCGCTAGA TATCTACCAG
CAAGCACTTT CTGAAGGCCG GCAACCAAAA TGCAAACGAT AA
|
|---|
| Protein sequence | MAAEGLRGNA NCSKARELVG NKRTRLSRKL QLLSLSALLL LIACATSPTG RSQLEFFPSS
QIAQMGKAAY QQIKQETPVS KDPQINRYIR CVANAITPLV PPLENGEQWE VTVFKADQAN
AFALPGGHIG IYTGLLSVAE NADQLAAVIG HEIGHVIAEH ANARMSTQYA TQAGLQLIQA
LAGVPGSATG QQLMALMGVG AQVGIILPFS RAQESESDIL GLRYMAQAGF DPRQSIQLWQ
NMMAANDGRK PPEFLSTHPS EKTRISELEQ RLPQALDIYQ QALSEGRQPK CKR
|
|---|
| |