Gene Noc_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1307 
Symbol 
ID3706322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1453262 
End bp1453900 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID637737807 
Productperoxidase 
Protein accessionYP_343336 
Protein GI77164811 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.144787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAC ATATCGGCGA TGTCGCGCCG GATTTTACGC AAGAGTCCAC AATAGGTCCG 
CTTCACTTTC ATGACTGGAT TGGTAACGGC TGGGCGGTGC TCTATTCCCA TCCTGCCGAC 
TACACGCCAG TGTGCACCAC AGAGCTAGGT ACCACCGCCA AGCTAGCGGA TGAGTTTAAA 
AAGCGTGACG TCAAGGTGGC GGCCCTAAGC GTTGACGATG TGGATTCCCA TAAGGGGTGG 
ATTAGCGACA TTAATGAAAC CCAAGGATGC CAAGTGAATT TTCCTATCAT TGCTGATGCG 
GATCGGAAGG TGTCCGAACT CTATGATATG ATCCATCCTG GCGCCAGTGA AACGGTAACA 
GTGCGCTCAG TCTATTTTAT TGATCCCAAC AAGAAGATTC GCGCTGTCAT TACTTATCCC 
CCGAGTACAG GCCGTGATTT CGGCGAGATT CTGCGGGTTA TCGATTCTCT ACAACTGACG 
GATAATTATA GCGTGGCGAC ACCAGTAGAT TGGAAAGATG GCGATGATTG CGTGATCGTT 
CCGTCATTAA CAGATCCGGA GGTTCTTAAA GAGAAATTTC CCAAAGGCTA CGAAGAAATT 
AAGCCTTATC TGCGCATGAC CCCTCAGCCG AATAAGTAG
 
Protein sequence
MALHIGDVAP DFTQESTIGP LHFHDWIGNG WAVLYSHPAD YTPVCTTELG TTAKLADEFK 
KRDVKVAALS VDDVDSHKGW ISDINETQGC QVNFPIIADA DRKVSELYDM IHPGASETVT 
VRSVYFIDPN KKIRAVITYP PSTGRDFGEI LRVIDSLQLT DNYSVATPVD WKDGDDCVIV 
PSLTDPEVLK EKFPKGYEEI KPYLRMTPQP NK