| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1300 |
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| Symbol | |
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| ID | 3706315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1438866 |
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| End bp | 1441010 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737800 |
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| Product | RelA/SpoT protein |
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| Protein accession | YP_343329 |
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| Protein GI | 77164804 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00320424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAA CTCAACACCA CGCTGATCAT TTATCGCCTC AGTCTGCCTC CCAATTGGAA
GAAGCCCGGG AGCTTCTAGC AGATCAAATT GATGATAAGA GCCAAGTGAT GTCTTTGATC
GTCCAGGGAG ACGCCATTGT GGAGTTGCTG GCAAAGTTGC AAGTAGATAC CGAGACCCAA
ATTGCTGGAC TATTGTTGCC AGCGATGGAA GCAGGGCTGC TTAAACAGGA AATTATCACC
AGAAATTTAG CTCCAACAAT TACTCGGCTA CTCCAAGGCG CTGAGCGCCT GGCGGTGCTA
AAACACTACC GTACTAATAA CGAAAAAGAT CCGATTCAAG CCGAAAAACT ACGTAAGATG
TTACTGGCTA TTGTGGAAGA CCCCCGGGTC GTCCTCGTAC GCTTGGCTGA TCACCTCTAT
CGCCTGCGCA ATGCTAACAA TGAAACCGCA GCGACTCGCC AAACTTTAGC CCAAGAAACT
CTGGATATCT TCGCCCCTCT GGCTAATCGC CTGGGTATCT GGCAACTCAA ATGGGAACTG
GAAGATTTAG CCTTGCGCTA TCTGGAGCCC CAGACTTACC AACGGCTAAC CAAAGCGCTG
AATAAGCGGC AGATAGACCG TGAGCGATAT ATTATCAAGG TAAAAGAACA GATCAAAGAA
GCACTTGCCC AGGCAGGCAT CCAAGGTCAA ATCAGCGGTC GCCCTAAACA TCTTTACAGC
ATCTGGAAGA AGATGCAGGC TAAAAACCTA GACTTCCATC AACTATTTGA TGTCCATGCC
TTTCGGGTCA TTGTGGTGGA TGTGAGGGAT TGCTATGCGG CCCTAAGCCT GGTACACACG
CTCTGGACAC CCATCCCTGA GGAATTTGAC GATTATATTG CCCACCCCAA ACCCAATGGT
TATCGTTCCC TGCATACCGC GGTTTTTGAC TCAGCGGGAA AACCCATGGA GATTCAGATC
CGCTCCTTGC AGATGCACGG GGAAGCCGAA CTGGGGGTCG CCTCTCACTG GCGCTATAAG
GAAGGGACAG AGCTGGATAC GGGTTTTGAG CAGCGCATTG CCTGGCTTCG AAGCTTTCTG
GACCGGAAGG AGACCGGCTC CAGTAGCACT GATCTCATTG AGCAATTCAA ATCCAAAGCC
TTCCATGACC GCATCTACGC GCTAACGCCT CGAGGACGAG TTATCGACTT ACCAGAAAAA
GCAACTCCCC TGGACTTTGC TTATGCCATT CATACTGAAG TCGGCCATCG CTGCCGGGGC
GCCAAAGTAA ACGGGGTCAT GGTGGCCTTA ACCCAACCAC TAGCCAGCGG TCAGGAAGTA
GAGATTCTCA CCACCCGGGA AGGCGCCCCC AGCCGGGACT GGCTTAATCT GCGCTTAGGT
TACCTCCATA CCCCAAGCGC TCGAGCCAAG ATTCAACGCT GGTTTAAGCA GCAAGATCAT
AGCCTCCATG CAGCCCGGGG CCGAACCCTG CTGGACCGGG AGCGGCAACG GCTCAAGCTT
GCGGAAGTGG ATTTAGCGCC ACTACTCAAG CGGTTTCGTC ACCCCCGCCC GGATAGCTTG
CTGGCATCGC TGGGCCGTGG AGATATCAGT CTTGGTCAGC TAAATACAGC ACTCCGAGAA
CAACAGCCGG AACCCTCCCT GCCAACGCCT GGGGTAGACC CACCCCCCAT GACCTCCTCA
AGAGCTGAAA ATGCTATCCA CGTACTAGGA GTCAGCGATT TGCTATCGCG CCTCGCCCGT
TGCTGCAGCC CTATCCCCGG TGACCCGATT ACAGGCTATA TCACCCAGGG GAGTGGAGTA
GCCATCCACC GCCGCGATTG CCCCAATATT ATTAAGCTCT CGCAAGAGCG TCAAAACCGT
CTGGTAGAGG TGGCTTGGCG CCACCCAACG GGAGAGGCCC ACTCCATGGA TATCTCAATT
CAGGCGGAAG ATCGTAAAGG ATTACTACAG GACATCACCC GCCTTCTGGC GAAAAAGGAT
ACTAACATTC TCGCCATCAA TACGGTCAGC GATCGCACCT CTGGACAGGC CCATATGCGA
TTGACCATTG AAGTAAGTGA TACCGAGCAG CTAAACAGCT TACTCAAACG TCTCACCGGA
CTTCCCGGCA TCATGAATGC CCGCCGCTTC AATCCAGGGA AGTAA
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| Protein sequence | MISTQHHADH LSPQSASQLE EARELLADQI DDKSQVMSLI VQGDAIVELL AKLQVDTETQ
IAGLLLPAME AGLLKQEIIT RNLAPTITRL LQGAERLAVL KHYRTNNEKD PIQAEKLRKM
LLAIVEDPRV VLVRLADHLY RLRNANNETA ATRQTLAQET LDIFAPLANR LGIWQLKWEL
EDLALRYLEP QTYQRLTKAL NKRQIDRERY IIKVKEQIKE ALAQAGIQGQ ISGRPKHLYS
IWKKMQAKNL DFHQLFDVHA FRVIVVDVRD CYAALSLVHT LWTPIPEEFD DYIAHPKPNG
YRSLHTAVFD SAGKPMEIQI RSLQMHGEAE LGVASHWRYK EGTELDTGFE QRIAWLRSFL
DRKETGSSST DLIEQFKSKA FHDRIYALTP RGRVIDLPEK ATPLDFAYAI HTEVGHRCRG
AKVNGVMVAL TQPLASGQEV EILTTREGAP SRDWLNLRLG YLHTPSARAK IQRWFKQQDH
SLHAARGRTL LDRERQRLKL AEVDLAPLLK RFRHPRPDSL LASLGRGDIS LGQLNTALRE
QQPEPSLPTP GVDPPPMTSS RAENAIHVLG VSDLLSRLAR CCSPIPGDPI TGYITQGSGV
AIHRRDCPNI IKLSQERQNR LVEVAWRHPT GEAHSMDISI QAEDRKGLLQ DITRLLAKKD
TNILAINTVS DRTSGQAHMR LTIEVSDTEQ LNSLLKRLTG LPGIMNARRF NPGK
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