Gene Noc_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1299 
Symbol 
ID3706314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1438366 
End bp1438854 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID637737799 
ProductSEC-C domain-containing protein 
Protein accessionYP_343328 
Protein GI77164803 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0448026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAC TTACTAATTG TATCTGCGGC TCTGGTATAC CCTATACAGA ATGCTGCGGA 
CTTTACCATT CCGGTAAAAA AAATGCTCCT ACTGCAGAAA TACTTATGCG TACCCGCTTT 
ACGGCATTTG CTATGGAAAA CGAAGCCTAT ATACTGGAAA CCTGGGAACC CGCAAAGCGG 
CCATTAAGGG TAAATTTTCC GAAAAAGGGC ACTCAGTGGA AGCGCCTGGA GATTGTGGAA 
AAGAAAAAAG GGGGCAGTCA AGACACTAAA GGAATCGTTG AATTTAAAGC CTATTATCTA 
CTGGAAGGTG AAGAATATGC TGTCAATGAA ATCAGCCGTT TTCGCAAAGG GCAGGGACGG 
TGGTATTACC TGGATGGCGC AGTCAAATCC ATTGCCAAGG TAGGTCAACA AACCAATAGG 
GGGAAAAACG CGCCTTGCCC TTGTGGCAGC GGCAAGAAAT ACAAGCGTTG CTGCGGAAAG 
TCTAAATAG
 
Protein sequence
MEQLTNCICG SGIPYTECCG LYHSGKKNAP TAEILMRTRF TAFAMENEAY ILETWEPAKR 
PLRVNFPKKG TQWKRLEIVE KKKGGSQDTK GIVEFKAYYL LEGEEYAVNE ISRFRKGQGR 
WYYLDGAVKS IAKVGQQTNR GKNAPCPCGS GKKYKRCCGK SK