Gene Noc_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1273 
Symbol 
ID3706346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1410358 
End bp1411047 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID637737775 
ProductABC transporter, ATPase subunit 
Protein accessionYP_343304 
Protein GI77164779 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGG TACTAGAACT CCTCAGCCTT AGTAAGTCTT ACTGGGAAAG TGAAACCGAG 
CACCGGGTGC TCCATAATCT CACCGCCACG ATCCAAAAGG GTGAATGTAT AGTACTGCTC 
GGGCGTAGTG GCTCAGGCAA ATCCACCCTC CTTAACCTCA TTGCGGGTAT CGATTTCCCG 
AGTGCCGGCG AGGTGAACAT CAATGGGATA TCCTTGACTC AGCTCTCCGA GGAAGATCGC 
ACCCTGCTGC GCCGGCGTTA TATTGGCTTT ATTTTTCAGT TCTTCAATCT TATTCCCACG 
CTTACCGTAG AGGAAAATTT GTTGCTGCCC CTAGAACTTA ACGGCCGCAA TAATCCCACT 
GAACACGCTC ACGCTCAGAG TTTGCTCCAG GAAGTTGGCC TACTGGAACG TGCCCATAGC 
TTTCCTGATG AACTCTCTGG GGGCGAGCAA CAGCGCGTTG CCATTGCCCG CGCCCTGGTC 
CACGATCCCT TGCTGGTGCT GGCCGATGAA CCAACAGGAA ACCTGGATCT GGAAACCGGC 
CGCCGGGTTC TGGCTCTCCT AGACCGCCTG ACCAAACAAC AGGGTAAAAC CCTCATCATG 
GTCACTCATA GCCCAGAAGT AGTTGGACAA GCAGACCGCA TCCTGCGGCT ACGTCCCGAG 
GGGTTGGTCG CCGAGGAACT CCCCCAATGA
 
Protein sequence
MTPVLELLSL SKSYWESETE HRVLHNLTAT IQKGECIVLL GRSGSGKSTL LNLIAGIDFP 
SAGEVNINGI SLTQLSEEDR TLLRRRYIGF IFQFFNLIPT LTVEENLLLP LELNGRNNPT 
EHAHAQSLLQ EVGLLERAHS FPDELSGGEQ QRVAIARALV HDPLLVLADE PTGNLDLETG 
RRVLALLDRL TKQQGKTLIM VTHSPEVVGQ ADRILRLRPE GLVAEELPQ