| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1252 |
|---|
| Symbol | |
|---|
| ID | 3706364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1375799 |
|---|
| End bp | 1377256 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637737754 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_343283 |
|---|
| Protein GI | 77164758 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTC TTAGCCTAAT TCTAATTACG CCGGTTATCG GCGCACTAAT CATCGCATTC
ATGCCCCCCC ATAAATCTCT CTTAATACGC CGTACTACGG TGGGGGTATC AGCGCTCGTG
CTTATCCTTA GTTTTTCCCT ATTGTTAGTC TTTGATGCCA GTAGTCCCGA GTTTCAACTT
GTGGAACTGA AACCCTGGAA TCCAGAGCTG GGGAGTCACT ATGCTTTAGC CATGGATGGC
CTCGCCTTGC CCATGGTACT GCTGGCAACA CTGCTCTCGT TCATTGCCAT TTTGGCCTCT
TATAACATGA CTGATCGCCC CAAGGGCTAC AATATTGCCA TGTTAGTGCT GGAATGCGGC
GTGCTGGGCG TGTTCATGGC CGAAGACTGG GCGCTATTTT ACGTTTTCTG GGAACTGACC
CTAATCCCAA TGTTCTTTCT CATCGATCAG TGGGGCGGCA AACGCCGGCA GATGGCTAGC
TTGAACTTCG TGCTCTACAC CATGGGTGGC TCCGTATTCA TGCTGGTCAG CCTACTGATA
ATTTACACTT CATCCAGCGA GCACTCTACT ACCATCGCCG CCATGACCCA GGCCGCCTCC
CAAATGCCCC TGGATAAGCA AATACTGGTA TTTCTAGGGC TGTTAATTGG CTTTGGAGTT
AAGGTCCCTA TCTTTCCCCT CCATGGCTGG CTCCCTTTAG CCCATGTGGA GGCACCAAGC
CCCGTGAGTA TTCTGCTGTC TGGCATATTG CTAAAAATGG GGGCCTATGG CCTTATTCGC
GCTATCGGAA TGCTGCCGGA CGCAGCCCTC GCCCTTCAGC CTTTATTAGC TGGACTAGCA
CTGTTTAGTA TCGTCTATGG AGGGTTACTA GCCTGGCGCC AGAGCGATCT CAAAGCCATG
ATCGCCTATT CCTCGATTAG CCATATGGGG ATTGTTATTC TGGGTATCTC CGCCCTCAAT
GAAGCGGGTT TTTTGGGCGC AACCATGCAG ATGATCGCCC ATGGCTTGGT GGCCGGCTCC
CTGTTTCTGC TAATCGGCCT ACTCTACGAT CGAACTCACA GCCGTGAGGT CGCCGATTAC
AGTTCGCTGG TCCAAGTGAT GCCTAAATTT GCCCTGTTTA CCACGTTAGC CTTGCTGGCT
TCGATAGGCT TACCCGGCCT TGTTGGATTT CCGGCTGAAC TTCATGCGCT CATCGGCAGC
TTCGAACGCT GGGGTTGGTG GGTACTGCTA GTTAGTCTCG GTGTAGTCAT CAGCGCTGCC
TATGCCATGC GGACTATCGT TCGTTTATTT ACCGGCCCGG TTCGACCTGA AATGCGCGCT
TTGAAGGACC TGCATGGCAC GGAGCTCGCC TCCGCTGGGG TGTTGGCTTT CGGTATTATC
GCCTTAGGCC TGATGCCAGC CTCCGCCCTA GAATTATTTG GGGCTTACGT CATCAGTCTC
AGTGCCGGTT TCCCTTAA
|
|---|
| Protein sequence | MGFLSLILIT PVIGALIIAF MPPHKSLLIR RTTVGVSALV LILSFSLLLV FDASSPEFQL
VELKPWNPEL GSHYALAMDG LALPMVLLAT LLSFIAILAS YNMTDRPKGY NIAMLVLECG
VLGVFMAEDW ALFYVFWELT LIPMFFLIDQ WGGKRRQMAS LNFVLYTMGG SVFMLVSLLI
IYTSSSEHST TIAAMTQAAS QMPLDKQILV FLGLLIGFGV KVPIFPLHGW LPLAHVEAPS
PVSILLSGIL LKMGAYGLIR AIGMLPDAAL ALQPLLAGLA LFSIVYGGLL AWRQSDLKAM
IAYSSISHMG IVILGISALN EAGFLGATMQ MIAHGLVAGS LFLLIGLLYD RTHSREVADY
SSLVQVMPKF ALFTTLALLA SIGLPGLVGF PAELHALIGS FERWGWWVLL VSLGVVISAA
YAMRTIVRLF TGPVRPEMRA LKDLHGTELA SAGVLAFGII ALGLMPASAL ELFGAYVISL
SAGFP
|
|---|
| |