Gene Noc_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1242 
Symbol 
ID3706393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1362110 
End bp1363288 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content42% 
IMG OID637737744 
Producthypothetical protein 
Protein accessionYP_343273 
Protein GI77164748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACCA GACAGAATGA ACCTTCCTTA CCGTTAATAT CCCGAGTTCA AAGATTTTCC 
TTGCTTGTTG GAATAATAGG GCTAATGCTT TCCGGGGTTG GCGCCTATTT TCAGTATCAG
CAATTCCTGG TTTCTTATTT GTTCGCTTAC ATTTTTTGGA TCGGTATCTC CTTGGGCAGC
CTGGCGATCC TTATGATTCA TTATTTAACT GGCGGGACTT GGGGATTGCT TATTCGTCGC
CCTTTGGAGG CGGCAACCTG GGCGCTACCG CTTATGGTGG TTCTTTTTAT TCCTTTGGCT
GTGGGATTAT CTGAAGTTTA TGCTTGGGCG CGGCCTGAGG AAATAGCTAA TAATTCTTTG
TTGCAGAAAA AAAATTGGTA TTTAAATATC CCTTTTTTTC TTGTTAGGTC CACTACCTAT
TTTATTATTT GGCTGGGTAT TGCCTACTGT CTGAGCAGCT GGTCTAGAAA ACAAGATAAG
AATCCAAAAA CAGGAATTGT GTTAGGCCTC CAGCGATTGA GTGGAGGCGG ATTAATTTTA
TTATCTTTAA GTGTAACTTT TGCCGCTATC GACTGGGTGA TGTCTTTGGT TCCGGAGTGG
ACTTCAACGA TTTTCGGTTT TATTTTTGGA ATTAGCCAAA TGTTGGCTGC TATGACTTTC
GCGGTGATTA TTGCTGGTTA TCTGTCCAAC ATTAAAATAT TATCAGAAAC TTTTTCGCCT
GCTATTTTTC ATGATTTTGG TAATATTTTA CTGATGTTTA TTCTGCTATG GGTTTATTTA
TTTTATATGG AATATTTGAT TGTCTGGTCT GGAAATTTAC CCCGTGAAAT TTCCTGGTAT
GTCCCCCGCG TGGAAAGCAG TTGGCGGTGG GTAAGCATGT TGCTCATTGT ATTTTACTTT
ATTATACCCT TTGTGGCACT CCTGTTTCGT TCTTTAAAAA GAACAAGAAG TACCCTGGTG
GGGATCGCCG CTATTATTTT TCTCTCCAGT TTAGTGAATT CTTTTTGGCT AGTTGTGCCC
TCCCTGCGTA TTGAAGGCTT TGAACTTTAT TGGACGGATC TAGTGGTTCC CATTGGAATG
GGCGGGTTTT GGCTAGCCGT CGTACTTTGG CGGCTGCAAA ATGTCTATTC CCTACCTGCT
CGGATACCTG TAGAGGAAGC AATGGAGCAT GGCAGATAA
 
Protein sequence
MITRQNEPSL PLISRVQRFS LLVGIIGLML SGVGAYFQYQ QFLVSYLFAY IFWIGISLGS 
LAILMIHYLT GGTWGLLIRR PLEAATWALP LMVVLFIPLA VGLSEVYAWA RPEEIANNSL
LQKKNWYLNI PFFLVRSTTY FIIWLGIAYC LSSWSRKQDK NPKTGIVLGL QRLSGGGLIL
LSLSVTFAAI DWVMSLVPEW TSTIFGFIFG ISQMLAAMTF AVIIAGYLSN IKILSETFSP
AIFHDFGNIL LMFILLWVYL FYMEYLIVWS GNLPREISWY VPRVESSWRW VSMLLIVFYF
IIPFVALLFR SLKRTRSTLV GIAAIIFLSS LVNSFWLVVP SLRIEGFELY WTDLVVPIGM
GGFWLAVVLW RLQNVYSLPA RIPVEEAMEH GR