Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1242 |
Symbol | |
ID | 3706393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1362110 |
End bp | 1363288 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637737744 |
Product | hypothetical protein |
Protein accession | YP_343273 |
Protein GI | 77164748 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAACCA GACAGAATGA ACCTTCCTTA CCGTTAATAT CCCGAGTTCA AAGATTTTCC TTGCTTGTTG GAATAATAGG GCTAATGCTT TCCGGGGTTG GCGCCTATTT TCAGTATCAG CAATTCCTGG TTTCTTATTT GTTCGCTTAC ATTTTTTGGA TCGGTATCTC CTTGGGCAGC CTGGCGATCC TTATGATTCA TTATTTAACT GGCGGGACTT GGGGATTGCT TATTCGTCGC CCTTTGGAGG CGGCAACCTG GGCGCTACCG CTTATGGTGG TTCTTTTTAT TCCTTTGGCT GTGGGATTAT CTGAAGTTTA TGCTTGGGCG CGGCCTGAGG AAATAGCTAA TAATTCTTTG TTGCAGAAAA AAAATTGGTA TTTAAATATC CCTTTTTTTC TTGTTAGGTC CACTACCTAT TTTATTATTT GGCTGGGTAT TGCCTACTGT CTGAGCAGCT GGTCTAGAAA ACAAGATAAG AATCCAAAAA CAGGAATTGT GTTAGGCCTC CAGCGATTGA GTGGAGGCGG ATTAATTTTA TTATCTTTAA GTGTAACTTT TGCCGCTATC GACTGGGTGA TGTCTTTGGT TCCGGAGTGG ACTTCAACGA TTTTCGGTTT TATTTTTGGA ATTAGCCAAA TGTTGGCTGC TATGACTTTC GCGGTGATTA TTGCTGGTTA TCTGTCCAAC ATTAAAATAT TATCAGAAAC TTTTTCGCCT GCTATTTTTC ATGATTTTGG TAATATTTTA CTGATGTTTA TTCTGCTATG GGTTTATTTA TTTTATATGG AATATTTGAT TGTCTGGTCT GGAAATTTAC CCCGTGAAAT TTCCTGGTAT GTCCCCCGCG TGGAAAGCAG TTGGCGGTGG GTAAGCATGT TGCTCATTGT ATTTTACTTT ATTATACCCT TTGTGGCACT CCTGTTTCGT TCTTTAAAAA GAACAAGAAG TACCCTGGTG GGGATCGCCG CTATTATTTT TCTCTCCAGT TTAGTGAATT CTTTTTGGCT AGTTGTGCCC TCCCTGCGTA TTGAAGGCTT TGAACTTTAT TGGACGGATC TAGTGGTTCC CATTGGAATG GGCGGGTTTT GGCTAGCCGT CGTACTTTGG CGGCTGCAAA ATGTCTATTC CCTACCTGCT CGGATACCTG TAGAGGAAGC AATGGAGCAT GGCAGATAA
|
Protein sequence | MITRQNEPSL PLISRVQRFS LLVGIIGLML SGVGAYFQYQ QFLVSYLFAY IFWIGISLGS LAILMIHYLT GGTWGLLIRR PLEAATWALP LMVVLFIPLA VGLSEVYAWA RPEEIANNSL LQKKNWYLNI PFFLVRSTTY FIIWLGIAYC LSSWSRKQDK NPKTGIVLGL QRLSGGGLIL LSLSVTFAAI DWVMSLVPEW TSTIFGFIFG ISQMLAAMTF AVIIAGYLSN IKILSETFSP AIFHDFGNIL LMFILLWVYL FYMEYLIVWS GNLPREISWY VPRVESSWRW VSMLLIVFYF IIPFVALLFR SLKRTRSTLV GIAAIIFLSS LVNSFWLVVP SLRIEGFELY WTDLVVPIGM GGFWLAVVLW RLQNVYSLPA RIPVEEAMEH GR
|
| |