Gene Noc_1240 details

Gene Information

• Locus tag: Noc_1240
• ID: 3706391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 1360883
• End bp: 1361425
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637737742
• Product: transmembrane prediction
• Protein accession: YP_343271
• Protein GI: 77164746

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.861409
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA TAGCTATTAA AAATTACGGC CTTATGGCTG AATTTGAAAC GCCGGAACTG 
CTCGTGCAGG CGGTGAGAGA AAGCCGCCTA AATGGCTACC AGGCAGTTGA AGCCTATACG 
CCTTTCCCTG TCGAAGGATT AGATGAAGCC CTGGGACTTC GTCGCGATTC ATTGCCTTTT 
TTTGCCTTGG TAGGCGGTTG TATAGGGGCC GTTAGTATTT ACTTTGTGGA ATATTATTCC 
GCAACCATTG ACTACCCTAT TAATAGCGGT GGCCGTCCTT ATCATAGCTG GCCTGCTTTT 
ATTCCCCCCG CTGTGGAAAT GGCTATCCTG GGCGCTGCTT TAGCGGTGGT GCTTGGCATG 
TTGATATTAA ATAGATTGCC TAAATTACGT CATCCTATTT TTGGTGTATC CCAGTTTGAT 
ATGGCGGAGC GTGATCGCTT TTTTCTGTGC ATTAGCGCTC ATGATCCGCT ATTTGATGAA 
AACCGGGCGC AGCGTTTTCT TGAGAGCCTG GAACCGGCAG GTATCCATAA GGTCAAGGGA 
TAA 

 

Protein sequence

MNKIAIKNYG LMAEFETPEL LVQAVRESRL NGYQAVEAYT PFPVEGLDEA LGLRRDSLPF 
FALVGGCIGA VSIYFVEYYS ATIDYPINSG GRPYHSWPAF IPPAVEMAIL GAALAVVLGM 
LILNRLPKLR HPIFGVSQFD MAERDRFFLC ISAHDPLFDE NRAQRFLESL EPAGIHKVKG