| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1235 |
|---|
| Symbol | |
|---|
| ID | 3706386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1353037 |
|---|
| End bp | 1353786 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637737737 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_343266 |
|---|
| Protein GI | 77164741 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG TAAAGCCGTT AGTTACGGTG GTGGTCCCTT CCTACAACCA AGGCTGTTAT
CTCGAGCAAG CATTGGCTTC CGTGTTTGGG CAGCAATTGC CTGTCGAAGT ATTTGTGATG
GATGGCGGCT CCAAGGACAG CTCGCTTGCG ATTATCCACG AATGGGAGCA TCGTTTATCT
GGTTGGCGCA GTCATCCTGA TCAAGGACAG GCCGCAGCTA TCAATGAGGG AATCGGGTGG
GGAGAGGCGC CTTTTGTGTG TTGGTTAAAT AGCGATGATT GGCTACTGCC GGCAGGACTC
ACCTATTTAT ACCAAGCCTT GCAGCAATCT TTAGAAGCAC CTGCAGCTTA TGGGCGCTCA
TGGAATTTTA TTGAGAAAAC CGGGAATCGA CGGGCCGTCT GGGTAGAACC TTTTAACGAA
CGCCGTCTGG CGTTACGTTG TATTATTTCG CAACCTGCAA CGTTGATTAG GCGCTCTGCC
TGGGAAGTCA TGGGGGGGCT GAATGAAAAT CTTCACATGG CCATGGACTA TGATTTATGG
TGGCGTCTAT TTAAAAGATT CGGCCGGTTA CATTTTGTAG ACAAATTCGT TGCGGTGAAT
CGGGATCATA TGGCTACCAA AACAAAAAAC CAACGCCGTT TACACTACCA GGAAGCTATC
AGGACTGTCC GCCAACATTA TGGGCGCGTT CCTTTGAAAT GGTGGCTCGC CCAACCCTAT
GCGATCTGGT TTAAAGCGTT ACATAGATAG
|
|---|
| Protein sequence | MTTVKPLVTV VVPSYNQGCY LEQALASVFG QQLPVEVFVM DGGSKDSSLA IIHEWEHRLS
GWRSHPDQGQ AAAINEGIGW GEAPFVCWLN SDDWLLPAGL TYLYQALQQS LEAPAAYGRS
WNFIEKTGNR RAVWVEPFNE RRLALRCIIS QPATLIRRSA WEVMGGLNEN LHMAMDYDLW
WRLFKRFGRL HFVDKFVAVN RDHMATKTKN QRRLHYQEAI RTVRQHYGRV PLKWWLAQPY
AIWFKALHR
|
|---|
| |