Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1232 |
Symbol | |
ID | 3706383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1347993 |
End bp | 1351106 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637737734 |
Product | glycosyl transferase family protein |
Protein accession | YP_343263 |
Protein GI | 77164738 |
COG category | [H] Coenzyme transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGACA GCTCATCGGT CGTATTTTTG CTAGGAGTGC CCCGTTCAGG TACAACTTTA CTTTCTTGGT TGCTTAATCA GCACCGGAGT ATTTACTGCC CGCCGGAGCC GTGGCTGCTG CTGGGACTAG AATCGCTTGG ACAGGTTCCT GCTGATCACG TTGCCGATCC GCCTCTTTTG TCTAGCGCGG TTGCTGAGTT TTTAGGAGCT AGACGATTAC AGAGTCTCAA GCGGGCAGCC TTATCTATTT ATCAGCACGC CTTGGAGGAA GCGGGAAAAT CTGTTTTTAT TGATAAAACC CCTCGTAACT ATCATGCCCT TGATTTTGTG CAGGAGTTTC TGCCGGAAGG AAAAATTATT TTTCTCGTAC GCAATCCCCT TGATGTGGCG GCTTCTTTTA AAACTTCTTG GTCGGTGGAA CTTCCAAAAA TTATCTCTAA TCAGGAAGAT ACTCCTTTTA TTTTTGACTA TATTCTAGGT TTTAATAGAC TGCTGGATTT TGAAGAAAAT TATCCCGTGC TTAGAGTTCG TTATGAGGAC TTGGTTGTTG ATCCTGATGA ACAAATGGTG CGTATCTTTA AGTATCTAAA ACTCCCACCG CAAGCAATTA ATAAGGATTT GGACATTCAA AAAACCTCCT ATGCCAGGAG TTCTCTCGGC GATAAGAGAA TTCTTGCGAC GCCCTCTATT CATACGCGAT CTATTGATGC TTATAAGGGT GTTTTCAAAA AAGGGGAAAT TCAAACTCTT TTGAATTCCT TGGGAGAAAA ATCTTTTTTT AAATTAGGTT ATGCCCAACA ATATGCTGAT GCCTGTGCAG AATTCGAAAT AATGCCTTGT CACGAGATCT CTTCACGGCT GCTAAAAACA GCGGAAGGAT ACGTGCAACG ACGCCAGAGG CGTTGTTCTG ACCTCCAGTC ACGAGGTATT TTCGAGCAAA AAATAGAATA TTTAAGTCAA CAAATTGAAT GCTTGAAGCA ACAAAATGAA ATTGCCCAGA AGCGCAATCA GGATATTAGT AATGAATTAA AATCCGCTCA GAGGCAAAAT AGCACGCTTA ATAAGCAGTT AATTCTATCG AGAACAGAAA AGGAAGAATT TAAGAAGCAA TTCCATTCGT TGCAAAATAT GGGTTTGAAA GCGCGTTTAC ATGGGGATCT TGGATATATT AAAAAACGCT TAAAACAGAA AATCAAAGAT GGCCTTTGGC ACGTAGTACA AGGGCCGCCC GCACCGCCAT TACCAAGAAT AACGATAGTT ACGCCGGTGC TTAATGGCGC TCAATTTATT GAAGCGACGC TGCGCTCGGT GCTGGTACAA GAATATCCCG CACTGGAATT TATCATCGTT GATGGTGGTT CCACTGATGA TACCTTGTCT ATTATAGATA GCGTTCAAAA TAGTTCTGAT TTTAAGGATA GAATTAGTTG TGTCATATCA GAGCCTGATG GCGGCATGTA TGATGCTATC GCTAAGGGCT TCTCGCGGGC AACGGGTGAA ATACTGGGAT ACCTAAATGC TGATGATTTA CTTGAAGGCG GGGCCTTAGC TGCTGTTGGC AGTTATTTCT CCCGCCATCC GAAAGTAGCC GTAATCTACC ATGAGGACAC TGTTTTGGTG AACGGGTGGA AATATCCCAA CGTTCGGCAG CCAAAGGGGA TAAATACGGT TGATCTGCTT AATAAGCATA TTTTATTTCA GGACGGTGTT TTTTTTAGGC GGGAAGCTTA CCAAACCATT GGTGGTTTAC GGCGTGATTT AAAATTAGCG GGAGATTATG ATCTCTGGTT GCGTTTATCG GCTCGTTTTA AATTTATCCG TAGGTCAGGG CATGTTAGTT GTTTCCGTAT TCGCCGGGGG CAATTTAGCG AAAATATGGA AGCTTATAAT GAAGAAATGG AACGTGCGCG CCATGATTTT TTATCCCAAG CTTCCCGCTT GCAAATACTT CGCTGGGAAA TTCAAAAGAA ATATCTTTTT TTCAGTAAAT CTATAGAAAA AATTTCGAGG CGCCACCGCT TATTTTTCCC CCTCGATTTT AGCAATTTGC CGCCACCGCC TGTTAGTTTG TCTGGAACGG AGTATGGACA GGCATTAAGC CCCATTGATG GCAAGTTGGC AGAGCGGTTC TTGTTTAGTA CTCCAGATAC TCGCTTTGGC GATAAGATGA TCAATTATAT CTACCTGGAT ACCCGTCATC TCATTGCGAT TACTTATCCG CCTATCCAGC CTGCTGAACT TGACAGATTG TATAAGCGCC ATTATTCTGC GCCGCCCTCA TCGATCAATA ACCCAGAGAG TCCTTCGCCC TATCGTCAGT TCGAGGGTAA ACGCCCCTGG GAGAAATTGC TTCTGAGGCT ACCCGTGGAG CGGTGGCTTT CGTATTTTTT TTCCAAAGAT CTCTGGCTAG ATAATACCCT GAATGAGTTG AGTAATACGC TTCAATCTTC ACAAATTAAT ATTCACAGCC CACTTCGAGT ACTTGATACT GGTTGTTTTG AGGGCCATTT ACTCGATGGC ATTGCCGCCC GGAAATCCTG GCGAGGTTAT GGCCTGGAAC CCAATATCCA AGCGGTGGAA ATTGCTCGTG GTAAGGGGCA TTGTGTTTGG CAAGGACGTG CTGAAGATGC TGTTGAGATT ATTCCATATT CCTATCAGTT CGATGTCATT TTCATGGGGC AAAGTATTGA GCATACAGAT GATCCGGTGC GGGTCCTGCG CCGTCTTCGT CTGCTACTTG CCCCTGGTGG CGTTCTGGTC GTGAGTACGC CTAATTTGGA TTCCCGGCAA ATTACCTGGT TTGGCCCAAC TTGGGCTCAT TGGCATGCAC CCTATCATCG CTATATTTTT TCGAGGAAGG GTTTATTCGC CCTAGCCAGA CAAACAGGTT TGCATCCTGT TTGTTTCAAA ACCTTCTCCC ATTGTTACTG GACTGCCATG TCACTAATGC AGAATTTTAT CGGGCTTGGA GGTAGCGTAT CCCATACAGT CGATTTTGAT CATCCCCTGC GTTTACGGGC GCAAAGAATT AATTTTTGGC AGCAGTTTTT TTGGAATCGT ATAGGCAAAG GGGATTATTG CTTCTTTGTG ATGAGGGATG AGGAAAGTGG CTAA
|
Protein sequence | MTDSSSVVFL LGVPRSGTTL LSWLLNQHRS IYCPPEPWLL LGLESLGQVP ADHVADPPLL SSAVAEFLGA RRLQSLKRAA LSIYQHALEE AGKSVFIDKT PRNYHALDFV QEFLPEGKII FLVRNPLDVA ASFKTSWSVE LPKIISNQED TPFIFDYILG FNRLLDFEEN YPVLRVRYED LVVDPDEQMV RIFKYLKLPP QAINKDLDIQ KTSYARSSLG DKRILATPSI HTRSIDAYKG VFKKGEIQTL LNSLGEKSFF KLGYAQQYAD ACAEFEIMPC HEISSRLLKT AEGYVQRRQR RCSDLQSRGI FEQKIEYLSQ QIECLKQQNE IAQKRNQDIS NELKSAQRQN STLNKQLILS RTEKEEFKKQ FHSLQNMGLK ARLHGDLGYI KKRLKQKIKD GLWHVVQGPP APPLPRITIV TPVLNGAQFI EATLRSVLVQ EYPALEFIIV DGGSTDDTLS IIDSVQNSSD FKDRISCVIS EPDGGMYDAI AKGFSRATGE ILGYLNADDL LEGGALAAVG SYFSRHPKVA VIYHEDTVLV NGWKYPNVRQ PKGINTVDLL NKHILFQDGV FFRREAYQTI GGLRRDLKLA GDYDLWLRLS ARFKFIRRSG HVSCFRIRRG QFSENMEAYN EEMERARHDF LSQASRLQIL RWEIQKKYLF FSKSIEKISR RHRLFFPLDF SNLPPPPVSL SGTEYGQALS PIDGKLAERF LFSTPDTRFG DKMINYIYLD TRHLIAITYP PIQPAELDRL YKRHYSAPPS SINNPESPSP YRQFEGKRPW EKLLLRLPVE RWLSYFFSKD LWLDNTLNEL SNTLQSSQIN IHSPLRVLDT GCFEGHLLDG IAARKSWRGY GLEPNIQAVE IARGKGHCVW QGRAEDAVEI IPYSYQFDVI FMGQSIEHTD DPVRVLRRLR LLLAPGGVLV VSTPNLDSRQ ITWFGPTWAH WHAPYHRYIF SRKGLFALAR QTGLHPVCFK TFSHCYWTAM SLMQNFIGLG GSVSHTVDFD HPLRLRAQRI NFWQQFFWNR IGKGDYCFFV MRDEESG
|
| |