Gene Noc_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1231 
Symbol 
ID3706382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1347283 
End bp1347990 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID637737733 
Producthypothetical protein 
Protein accessionYP_343262 
Protein GI77164737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG TCATCGTGCA TATTCCTAAG GCGGCGGGTA CTTCACTCAA GGAAGCTATT 
TCCGCTAAAG TAGGTATCGA TAATATTCAT TTTGATTATG ATCGCCCCCT CGCCAGGGGT 
GATTTATCAA GGAATGCTCG TTGCTTGGCC TCAAGTATTA CCGTTAAGCC GAGAGAAGAA 
TCAATTATTT TCGGTCATTT CCTAGTGGGA AAATATGCTA GATTTAACGG CTGTTATTTT 
AGGCGCCGTA AAAAAATATT TTACGTGACT TTTCTCAGAG AACCTTTACA AAGAGCAATA 
TCGCATTTTT TTTTCTGGAA AAGAACGGCT GTTCAAGGAC ATCGGGTTTG GGAGCGTTTT 
ACTCAAGAGA ATTGGAGCTT AGAAAGATTC CTGCTATCTA GGGAACATAC TAATTTCCAG 
GCCAAATTCC TTTGGCGATT TCCGTTGAAT CAGTTTGACT TTATCGGTTT AACAGAATAT 
TTCCATGATA GCGTAGAAAT GCTGGGACGC GTTTCTCCAC TGCTAAGCGG CTTGCCAATA 
AAAACAGAAA ACGGTAATCC AAAAAATTCT ATTGGAGCGA GTTATAGCAT TGATTCCTGT 
CTGGCATCCG AGTTTATGCG CCGCAATGAA TTGGATTACG ATTTATATAA TCAAGGAGTT 
AAACGTTTTC TTATACAAAA ACACAAACTT TTAAAGGCAA AGGGATGA
 
Protein sequence
MKIVIVHIPK AAGTSLKEAI SAKVGIDNIH FDYDRPLARG DLSRNARCLA SSITVKPREE 
SIIFGHFLVG KYARFNGCYF RRRKKIFYVT FLREPLQRAI SHFFFWKRTA VQGHRVWERF 
TQENWSLERF LLSREHTNFQ AKFLWRFPLN QFDFIGLTEY FHDSVEMLGR VSPLLSGLPI 
KTENGNPKNS IGASYSIDSC LASEFMRRNE LDYDLYNQGV KRFLIQKHKL LKAKG