| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1225 |
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| Symbol | |
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| ID | 3706415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1341340 |
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| End bp | 1342308 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637737727 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_343256 |
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| Protein GI | 77164731 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.65797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTTT ACCGGGAAGC CTTCAAGGCG ATGGGTACGC CCTGTGAAAT TCAGCTCTAT
GCCAAGACTA AGGTTCAAGC TCAACGGGCC GCGGGACTTA TTATCGCCGA TGTGCGCCGG
TTGGAAGCTC GCTATTCCCG CTACCGCACT GATAGTTTTC TCTCCGATAT CAACCGGGTG
GCCATGGCGG GTGGGCGTAT TTCGGTAGAC AAAGAAACAG AAGGATTGCT CAATTATGCA
GCTACCTGTT ATGGGCAAAG TAAAGGATTA TTTGATATTA CTTCCGGTAT TTTACGGCGC
GCTTGGGATT TTAAATCAGG CGAGCTGCCG AGCAGGGTGC AAGTACAGGA ACTGCTGGAC
AAAATTGGCT GGGAAAAACT GCGCTGGGCG CCGCCGGTAT TAGAATTTCC CATAGCTGGA
ATGGAGATTG ACTTTGGAGG TATCGTCAAG GAATATGCCG CCGACCGGGC GGCTTCGCTG
AGCTTACAGG CAGGAGTTCG GCGAGGCCTA GTAAACTTAG GCGGTGATAT CAAAGTGATT
GGTCCTCGCC CGGACGGTGA GCCTTGGCGG ATTGGTATCC GCCATCCTGG ACATAAAGAA
GCCGCGATGG GAATGCTGCT GCTACATAAA GGCGCGATTG CTAGTAGTGG TGACTATGAG
CGCTGCATTG TATTAGATGG CGTTCGTTAC GGCCATGTCC TCAATCCTCA GACGGGTTGG
CCGGTACGGC ACTTGGCATC GGTGACCGTA ATCAGTGATT TATGTGTGGT AGCAGGAAGC
GCTTCTACTA TTGCCATGCT AAAAGAGGCT AATGGTTCAG CCTGGTTGCA GAATTTGGGA
TTACCTCATT TCTGGGTGAA CATGGAAGGT GAAACCGGTG GTTCCCTAGA GGAAGGCTCC
ATTGAAGCTG TTGCTATGGT TCAAAACAGC GAGCGCCAGG CGGCAATCAC GGTACTCAAC
GAATATTAA
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| Protein sequence | MKLYREAFKA MGTPCEIQLY AKTKVQAQRA AGLIIADVRR LEARYSRYRT DSFLSDINRV
AMAGGRISVD KETEGLLNYA ATCYGQSKGL FDITSGILRR AWDFKSGELP SRVQVQELLD
KIGWEKLRWA PPVLEFPIAG MEIDFGGIVK EYAADRAASL SLQAGVRRGL VNLGGDIKVI
GPRPDGEPWR IGIRHPGHKE AAMGMLLLHK GAIASSGDYE RCIVLDGVRY GHVLNPQTGW
PVRHLASVTV ISDLCVVAGS ASTIAMLKEA NGSAWLQNLG LPHFWVNMEG ETGGSLEEGS
IEAVAMVQNS ERQAAITVLN EY
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