| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1214 |
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| Symbol | |
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| ID | 3706404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1326967 |
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| End bp | 1329096 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737716 |
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| Product | RelA/SpoT protein |
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| Protein accession | YP_343245 |
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| Protein GI | 77164720 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGCGC CAGGGAGTAT CGATAGTCTC TGCGCAAGCG TAGCGGACTA TCTTGATCCG
GGCCTGCAAA GCGAAATCCG GCGCGCTTAT GATTTTGCCG TTGTCGCTCA TGGAGAGCAG
AAACGCCGCT CTGGCGAACC CTACATTACC CATCCTCTGG CAGTGGCGGG GATTATGGCG
GAAATGCACA TGGATCATCA GTGTGTTATG GCTGCCCTGC TGCACGATGT TTTAGAAGAT
ACGGGCGCTA CGAAAGCTGA CCTGGCCCAA TATTTTAGTG AGGAGGTTGC TGAGTTAGTG
GATGGGGTCA GCAAGCTTGC CCAGATTAAT GCCACCTCCC GCGAGCATGC GCAAGCGGAG
AATTTGCGCA AGATGCTATT GGCCATGACT CGGGATATCC GAGTCATTCT GCTGAAATTG
GCCGATCGCC TTCATAACAT GCGCACATTA GGTTATGTAG CGCGGGAAAA ACAGCGCCGT
ATTGCCCGCG AAACCTTGGA AATCTATGCA CCTATTGCTA ACCGCTTGGG GATGGACAGC
ATTCGCCGGG AGTTGCAAGA TTTAGGCTTT CAAATGCTCT ACCCGCTCCG TTATCGGATT
TTGGAGGCGG CGGTTAGGCG GGTCCGGGGG AATCGCAAGG AAATCGTAAA GACTATTCAG
GCTACGACTA CCCAGCGGCT AGCCCAGGAG GGGCCGGCAG GCTTAGTGGA AGGGCGGGAA
AAAAGCCTTT ATAGCCTTTA TGTGAAGATG CGAGATAAAC GCCACTCCCT TTCCGAAATA
ATGGATATTT ATGCCCTTCG CATTACCGTG GACTCGGCGG ATAAGTGTTA CCGTGCGTTA
GGAGTTATTC ATAATCTTTA CAAACCTGTT CCTGGTAGAT TCAAGGATTA TATTGCTATC
CCCAAGGCCA ATGGCTACCA GTCCTTGCAT ACGGTTTTGT TTGGCCCCCA TGGTGTGCCG
ATTGAAGCCC AGATCCGGAC CCATGATATG GAGCGGGTAG CAGAGGCAGG AATTGCCGCC
CATTGGTTAT ATAAGTCAGG TGGCGAGCGG ACTCAGCACC GGGCCCGGGT GTGGCTTAAA
GGTTTGCTGG AAATGCAGCA GGATGCGGGA GATTCCCTGG AATTTCTCGA GAATGTCAAA
GTCGATCTAT TTCCCGATGA AGTCTACGTG TTTACTCCCC GCGGTAAGAT TATGATTTTG
GTCCGGGGCG CCACAGCAGT AGATTTTGCC TATGCGGTAC ACACGGATGT GGGTAATCGC
TGCGTTGCTG CTAAGATTGA CCGGCGGCTG GTGCCTTTAT CCACTCCCCT GGAGAACGGG
CAAAATGTAG AAATCATCAC GGCTCCCACG GCCCGGCCCA GTCCATACTG GCTTAACTTT
GTGGTGACCG GTAAAGCACG GGCCAATATT CGGGGTTATC TTAAAAACTT AAAACGGGAA
GAGTCGATTG AGCTGGGCCT GCGGCTGCTG AATAGGCAGC TTTTGAGCTA TTCCCTGACG
CTGGATGATA TCTTCCCGGA GCGTCTACAG TTTCTCCTTA AGGAATTCGG ACTAGAAAAT
CTCGATCAGC TCCTAGAAGC TGTTGGGCTT GGCAACCGCC CCGCCTTGCT TGTTGCCCGG
CGTTTGGTGC CGGATCGGGA AGCAAAAGAG GAAGAAAAAA AGCTGGAGGC TGGTGATTCT
GCTCGACAGC CCTTAAGAAT TAAGGGAACC GAGGGAATGG TGCTCACTTT TGCTAAATGT
TGCCGCCCTA TTCCAGGTGA TCCTATTCGT GGTTTCGTCA CTGCGGGGCG GGGGATTGTG
ATTCATACGG AGCGGTGTAA AAATCTGGCT GAATTCCGGG GCCGGCCTGA GTGCTGGACC
GAAGTAGAAT GGGCCGAGGA GGTACGGGCT GAGTTTCCGG TGGAAATCCG GGTGGATGTA
GAAAACCGCC GTGGTGTGCT TGCCACCGTG GCCGCCACCA TCTCTGATAC CAACACCAAC
ATTGATAATG TTAGCCTCGA TGATCAGGAT GGTACTATTT GTAGCATTTT GTTTACCCTG
GAAGTCCGGA GCCGCTACCA GCTAGCGCAT ATTATGCGGC GGCTCCGGAC TCTCGATATG
GTGTTGCGTA TTGTTCGCGG CAAGCATTGA
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| Protein sequence | MPAPGSIDSL CASVADYLDP GLQSEIRRAY DFAVVAHGEQ KRRSGEPYIT HPLAVAGIMA
EMHMDHQCVM AALLHDVLED TGATKADLAQ YFSEEVAELV DGVSKLAQIN ATSREHAQAE
NLRKMLLAMT RDIRVILLKL ADRLHNMRTL GYVAREKQRR IARETLEIYA PIANRLGMDS
IRRELQDLGF QMLYPLRYRI LEAAVRRVRG NRKEIVKTIQ ATTTQRLAQE GPAGLVEGRE
KSLYSLYVKM RDKRHSLSEI MDIYALRITV DSADKCYRAL GVIHNLYKPV PGRFKDYIAI
PKANGYQSLH TVLFGPHGVP IEAQIRTHDM ERVAEAGIAA HWLYKSGGER TQHRARVWLK
GLLEMQQDAG DSLEFLENVK VDLFPDEVYV FTPRGKIMIL VRGATAVDFA YAVHTDVGNR
CVAAKIDRRL VPLSTPLENG QNVEIITAPT ARPSPYWLNF VVTGKARANI RGYLKNLKRE
ESIELGLRLL NRQLLSYSLT LDDIFPERLQ FLLKEFGLEN LDQLLEAVGL GNRPALLVAR
RLVPDREAKE EEKKLEAGDS ARQPLRIKGT EGMVLTFAKC CRPIPGDPIR GFVTAGRGIV
IHTERCKNLA EFRGRPECWT EVEWAEEVRA EFPVEIRVDV ENRRGVLATV AATISDTNTN
IDNVSLDDQD GTICSILFTL EVRSRYQLAH IMRRLRTLDM VLRIVRGKH
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