| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1211 |
|---|
| Symbol | |
|---|
| ID | 3706401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1325253 |
|---|
| End bp | 1325714 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637737713 |
|---|
| Product | cytidine/deoxycytidylate deaminase, zinc-binding region |
|---|
| Protein accession | YP_343242 |
|---|
| Protein GI | 77164717 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.728122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACC TTCGACGCTG TGTAGAACTT GCAACTAAGG CACTGGAGTC GGGTGATGAG
CCATTCGGCT CCGTGCTTGT GGCAGCGGAC GGGGAGGTGC TTTTTGAAGA CCGCAACCGG
GTAGCCTCGG GAGATCGAAC CCGCCATCCG GAGTTTGAGA TTGCACGGTG GGCTGCCACA
AACATGACCC CGGAGGCCAG AGTAGCAGCA ACCGTCTATA CCTCCGGTGA GCATTGTCCT
ATGTGCGCCG CAGCACACGG CTGGGTGGGC TTAGGTCGCA TCGTGTATGT GAGTTCCTCC
GAGCAATTGG CAACGTGGCT CACCGAACTC GGAGTTCCAG CACCTCCCGT ACGAACTCTG
CCAATCCGTA AAGTTGTTCC CAATGTGCCG GTAGAAGGTC CAGTTCCAAG TCTTGCCGAG
CAGGTGCATG AATTGCATCG TCGTTTTCAT GGCTCATCAT AA
|
|---|
| Protein sequence | MQHLRRCVEL ATKALESGDE PFGSVLVAAD GEVLFEDRNR VASGDRTRHP EFEIARWAAT
NMTPEARVAA TVYTSGEHCP MCAAAHGWVG LGRIVYVSSS EQLATWLTEL GVPAPPVRTL
PIRKVVPNVP VEGPVPSLAE QVHELHRRFH GSS
|
|---|
| |