| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1199 |
|---|
| Symbol | |
|---|
| ID | 3706697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1305832 |
|---|
| End bp | 1307064 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737702 |
|---|
| Product | transposase IS605 |
|---|
| Protein accession | YP_343231 |
|---|
| Protein GI | 77164706 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0968514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTG TACGCACGAC TAAAACCCGG CTGGATTGGG ACGTAGCAGC GGCGAAGCGC
ACTGTTGAGG CGTGGTCGGC AGCATGCAAT GACATCAGCC AGCAGGCTTT CGCTCAGGGC
TGTCTTTCCA ATACCGTGCG TTTGCATCGG CTGGTTTATA GGGATATTCG CACCCGTTTT
GGGCTTTCCG CCCAGGTGGC GCAGAATGCG ATTCGTCACG TGGCGAGCAA GTATGCCGGT
GCGCGAATAA AAAAGATTCA ACTCAAGCGT CCTGTCACCT TTTCCAAACA GTGTGCGGTC
GCCCTTCAAG GCGGTGAGCG TGGCCGTGAC TTTGGTTTTA GGCACAAGGG CGTCAGCCTC
TGGACCGTGG ACGGGCGTAT CAAAGGCCTT CCCTTCCACG GCGAACCTCG CCTTTGTGAA
TACCTTTCTG AGTGGAAGAT GGGTGATGGG CGTTTGTTCA TCGGCAAGGG CAAAGTGTAC
TTGTCGATTT CTTTTAAGCG CGAAGTCGAG ACTGTCTTCA AGCCCAACGA TGCCGTGGTC
GGCGTAGACC GAGGTATCCG CGTATTGGCG ACCGTCACCG ACGGCCAACG CCAGCTTTTC
TTCGGTGGCG GACACACCCA CCATGTGCGC AACCGTTACG CCAAAACCCG CGCTTCTCTC
CAAAAGAAAA AGGCACGAAC GGGTAGCCGC TCCACGCGGC GCACCCTGAA ACGGTTGTCT
GGCCGAGAGC GACGCTTTAT GAGAAACGAT AACCACGTGA TGAGTCGTCG TATCGTTGAT
TTTTCCAGGG ACACGGGCAA TCCAACGATT GCCGTAGAAG ACCTAGGCGG TATCCGCAAC
GGGCGCAAAC TTAGAAAGCA ACAGCGCACG GATCTCAACC GCTGGGCCTT TTATGAGTTG
GAGCAATTTA TCCGTTACAA GGCGGACACC TTTGGTATGG AGGTGATCGG GGTTGACCCG
AAGTACACCA GTCAGGGCTG TTCCCGCTGT GGTCATACTG AAAAAGATAA TCGACATCAA
CATCGGTTCC TCTGCAAAGC GTGTGGTTAT GAACTACACG CTGATTTAAA TGCCTCTCGC
AATATTCGCC TGAGAGGTAT CCTGGCAAGG CAAGTTCTTT GCGAGGATGG GTCGCTGTCA
TGCGGCCCTG AAGCACGGCT CGTTGATCCA GGCTCGAAAC CTGGGGAGGG CGCGGGCAAG
CCGTCTGCTT TAGCTGTGAC GGTACATGAC TAA
|
|---|
| Protein sequence | MEIVRTTKTR LDWDVAAAKR TVEAWSAACN DISQQAFAQG CLSNTVRLHR LVYRDIRTRF
GLSAQVAQNA IRHVASKYAG ARIKKIQLKR PVTFSKQCAV ALQGGERGRD FGFRHKGVSL
WTVDGRIKGL PFHGEPRLCE YLSEWKMGDG RLFIGKGKVY LSISFKREVE TVFKPNDAVV
GVDRGIRVLA TVTDGQRQLF FGGGHTHHVR NRYAKTRASL QKKKARTGSR STRRTLKRLS
GRERRFMRND NHVMSRRIVD FSRDTGNPTI AVEDLGGIRN GRKLRKQQRT DLNRWAFYEL
EQFIRYKADT FGMEVIGVDP KYTSQGCSRC GHTEKDNRHQ HRFLCKACGY ELHADLNASR
NIRLRGILAR QVLCEDGSLS CGPEARLVDP GSKPGEGAGK PSALAVTVHD
|
|---|
| |