Gene Noc_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1194 
Symbol 
ID3706692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1302419 
End bp1302898 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content46% 
IMG OID637737697 
Productferric-uptake regulator 
Protein accessionYP_343226 
Protein GI77164701 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGA CCCGTATCTT GGAAAGCCAA GACCTGCGCA AAGCTGGCCT TAAGGTAACT 
TTACCACGCC TTAAAGTGCT AGAAATCCTG GAAACCAGTT CTCAGCGCCA TATGAGCGCG 
GAGGATGTTT ATAAAGCCTT GCTTGATCAA GGTGAAGAAA TTGGGCTTGC TACCGTCTAC 
CGGGTACTTA CCCAATTTGA AGCCGCTGGC CTCGTTTCCC GTCACTACTT TGAAGGAGGC 
CAGAGTGGCG GTGTCCATTC TGTATTCGAA ATGGATAGTG GCGAGCACCA TGATCATCTA 
TTATGTGTCC GCTGCGGTAA AATCGAAGAG TTTGTAAATG AAATCATTGA AAAGCAGCAA 
GAAGAACTTG CTCGTAAGGC CGGATTCAAT ATGACGGATC ATTGCCTCTA CATTTACGGT 
ATCTGCGCTG ATTGCCAACA GGCTGAGTTC AGTAAGGATC AAAAGGTAAA AAAAACTTAA
 
Protein sequence
MMRTRILESQ DLRKAGLKVT LPRLKVLEIL ETSSQRHMSA EDVYKALLDQ GEEIGLATVY 
RVLTQFEAAG LVSRHYFEGG QSGGVHSVFE MDSGEHHDHL LCVRCGKIEE FVNEIIEKQQ 
EELARKAGFN MTDHCLYIYG ICADCQQAEF SKDQKVKKT